Rhinichthys klamathensis goyatoka (western speckled dace): 130078736
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Entry
130078736 CDS
T09701
Symbol
dscama
Name
(RefSeq) Down syndrome cell adhesion molecule a
KO
K06767
Down syndrome cell adhesion molecule
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130078736 (dscama)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
DSCAM family
130078736 (dscama)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_5
fn3_2
DUF6377
Motif
Other DBs
NCBI-GeneID:
130078736
NCBI-ProteinID:
XP_056100357
LinkDB
All DBs
Position
Unknown
AA seq
2024 aa
AA seq
DB search
MWILAIIFFQCILNVLSEDLHSSLYFVNASLQEVVFASTTGTLVPCPAAAVPPATLRWYL
ATGEESYNVPGIRHVHPNGTLQIFHFPPSSFSKVIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVADHTAMRGSVAVFKCIIPSSVENYITVVSWERDTVPLVSGARFLITSTGA
LYILDVQKEDELFNYRCMTRHRYTSETRQSNSARLFVPDPTNSAPAILDGFEKREVMASH
RVELPCKASGHPAPKYRWLKNNRPLESDSRFRQSVTGLLIERAQPSDSGSYVCEVWNSYG
NAEVIGRLTVKEPLKVVVSPRKVKGSVGSQVSLSCSVTGSDEFELSWYRNGDKIIAGANV
RMNGINKENLVMDGMAKSDGGAYQCFARKAKMSAQDFVQVILEDGTPKILSAFSEKVVGP
NEFVSLMCHVKGTPQPAVTWTLDDDVITKDSRHRIGHSITAEGNVVSYLNISHTQVRDSG
VYRCTGNNSAGTVSYQARINVRGSADIRPMKNLTAIAGRDMYIHCHVIGYPYYSIKWYKN
SNLLPANDRQRAFENNGTLKLLNVQKELDEGEYSCHVLVQPQLFKNQSVHVTVKVPPFIQ
PFEFPRYSIGHRVFVPCVVRSGDLPISITWEKDGKPINASLGVTIDNIDFTSSMRISNLQ
RVHNGTYTCIAQNDAAVVKYQSQLIVRVPPRFKVQPQDQDGIYGKSVTLNCSADGEPRPT
IEWKYSKGAGVPQFQPIALNSGFRVQLLGNGSLLIKHVLEEDAGYYLCKVSNDVGADVSK
SMYLNVKIPAMITSYPNNSLATKGEKIEMSCKAHGEKPIMVRWEKEVEKEKQSHMINPDM
WRHTVTVKNVGDEVVSTLQIYPTMREDSGFFSCHAINSYGEDRGILQLTVQEPPEPPKVE
IREVKERTIALRWTMGFDGNSPITGYDIECKNKTETWERARRTRDVSPTLNQATIIELHP
SSTYNIRIFAKNHIGDSEPSNELTVTTDEADPEGPPQDVTLEAITSQSIKVTWKAPLKHL
QNGVIRGYQVCHREHSINGSHQFVCISMEATGETESLSLNNLKKFTEYEVVVQASNSAGP
GPASSEVRATTMEDVPGRAPEKVLATAASPESISLSWQTPSREALNGVLQGFRIIFWANL
LDGELGEIRNVTTQKVPLELEGLEKYTNYSIQVLAFTRAGDGVRSDQIYIRTKEDVPGPP
GGVKAAAASSSVVYVSWLPPLKLNGIIRKYTVFCSSSYPTVVSEFEVSPDEFLHRVHNLS
RNRKYSIWVMAVTAAGRGNSSDVITVEPLAKAPAKILTFSGTVTTPWMRDVVLPCRAVGD
PPPAVKWLKESGSPAPAVIDGRRSIHGNGSFVIKTVKAEDSGYYTCVASNNWGTDEIILN
LQVQVPPDQPRLTVTKTTITSITVTWTPGDNGGSSIRGYILQYSEDNSEKWGSISISPSE
RSYRLENLNCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSKEQELFTSINGTCVK
LNLIGWNDGGCPITSFTLEYRPLDSPVWTKAKRTSLTKSYNLLDLQEATWYELQMKVYNS
AGLAEKRVKFATLNYDGSTIPPLVKTAVKDPIKKTSNEGMKMMVTISCILVGMVLLFVLL
MVLRRRRREQRLKRLRDAKSLAEMLMSKNTRPSDTMNKQQQTLRMHIDIPRAQLLIEERD
TMETVDDRSTVLLTDNDFGETAKQKSATVTHSVHYQSLSQATGPLVDVSDVRPGTSKSSL
SNPTSRRTAKAGPAARNRYASQWTLNRPHPPVSVHTLSTDWRLGTPRVAGSVDKESDSYS
VSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQM
TAGTNDYTDSLTSSTPSESGICRFTASPPKPQDVCRVINMAVPKAHRPGGELVHLPPYLR
MDFLLNRGVSGTSREAAMGQACLEPQKTRSLKRPGLLEPTPMEVPTSRDVQQWQPGTAST
LPQREAGTDLAQAAKISTSQESLLDSRGHLKQNNNPYAKSYTLV
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggccatcatctttttccagtgcattttgaatgttctcagtgaagaccta
cattccagcttgtattttgtcaatgcatctctgcaagaggtagtgttcgccagcaccacg
gggactctggttccctgtcctgcagcagcggtgccgcctgctaccctgcgctggtatctg
gccaccggcgaggagagctacaatgtcccagggatccgccatgtccacccaaacggcact
cttcagatcttccactttcctccgtccagctttagcaaagtgatccatgacaacacttac
tattgcacagcggaaaatccttcagggaaaattagaagccaagatgttcatattaaggcc
gttttacgagagccctatacggtccgtgtggcggaccacaccgcgatgagaggcagcgta
gcggtcttcaagtgcattataccttcctcagtggagaactacatcactgttgtgtcatgg
gagagagacaccgtaccactcgtctcaggggctcgatttctcataacgtccacgggggcc
ctgtacatcttagatgtgcagaaggaggacgaattattcaactaccgctgcatgacgaga
catcgctacacatccgagaccagacagagcaacagcgcacggctctttgtgccagatccc
acaaactcagcgcctgcaatcctcgatgggtttgagaagcgggaggtcatggcgtcccac
agggtggagctcccgtgcaaggcctccggacaccccgcaccaaaataccgctggctgaag
aacaacagaccactggaatcagactcgcgtttccgtcagagcgtgacgggcctgctgatc
gagagagcccagcccagtgacagcggcagctacgtgtgtgaagtgtggaacagctacgga
aacgcagaggtcataggtcgcctcacggtaaaagaacctcttaaagtggtggtcagtccg
cgaaaggtgaaaggcagcgtgggcagccaggtgtcgctatcctgcagtgttactggttca
gatgagttcgagctctcttggtaccgcaacggcgacaagatcattgccggcgccaacgta
cgaatgaacgggatcaataaggagaaccttgtgatggacgggatggcgaagagcgatgga
ggagcgtaccaatgctttgccaggaaagccaaaatgtcagctcaggacttcgtgcaagtc
attttagaagatggaacccctaagatcctgtccgccttcagcgagaaagtggtcggtccg
aacgagtttgtctccttgatgtgtcacgtaaagggaactccacagcccgccgtcacctgg
acgctggacgatgacgtcatcacgaaggacagtcggcaccgcatcggtcacagcataacg
gcggaggggaacgtggtcagctacctgaacatctcccacacccaggtccgtgacagcggg
gtctatcgctgcaccggcaacaactctgcagggacggtctcctaccaggctcgaataaac
gtaagaggttctgctgacatacgaccaatgaaaaacctcacagctatagcggggcgggac
atgtacattcactgccatgtgattggttacccgtattactccattaaatggtacaagaac
tccaaccttctccctgctaatgaccgtcaaagggcgttcgagaacaacggcacgctgaag
ctgctgaacgtgcagaaagaactggacgaaggagagtacagctgccatgtgctcgttcag
ccccagctgttcaagaaccagagtgtccacgtcactgtgaaagtgcctccctttatccag
cctttcgaattcccacgatattccatcggccatcgtgtcttcgtgccctgcgttgtgcgc
tcaggtgaccttcccatctctatcacctgggagaaagatggaaagcccattaatgccagc
ctgggtgttaccatcgacaacatcgacttcaccagctccatgcgtatctccaacctccag
cgggtgcacaacggcacctacacctgcatcgcccaaaacgatgccgctgtcgtcaaatac
cagagtcagctcattgttagagttccaccaaggttcaaagtgcagcctcaagaccaggat
ggaatctacggtaaatcggtcaccttgaactgctctgcggatggagagccacggccaact
attgagtggaaatactccaaaggtgctggggtgccccagtttcaacccattgctctaaac
tccggcttcagggtccagctgctcgggaatggctcactactgataaagcatgttcttgag
gaggacgcaggttattacctgtgcaaggtcagcaatgatgtgggagccgatgtcagcaag
tccatgtacctcaacgtgaaaattccggccatgataacatcgtatcccaacaactctctg
gcaacgaaaggagagaagatcgagatgagctgtaaggcccacggtgagaagcccatcatg
gttagatgggagaaggaggtggagaaggagaagcagtcacatatgatcaatccagacatg
tggcggcacacggtaacagtcaagaacgtcggcgacgaggtcgtctccaccctgcagatc
tatccaacgatgagagaggattctgggttcttctcctgtcacgccattaactcttatggt
gaagacagaggcatccttcagttaacggttcaagagccaccagagcctcctaaagtggag
attcgtgaggtgaaagagaggaccatcgccctccgctggaccatgggattcgatgggaac
agtcctatcaccggctacgatattgagtgcaaaaataaaacagaaacttgggaaagagct
cgcaggaccagagatgtttctcccaccttaaaccaggcgaccatcattgaactccaccca
tcgtccacatacaacatccgtatttttgccaagaaccacattggggacagcgaacccagc
aacgagctcaccgtaaccactgatgaagcagatccagaaggacctccccaagacgtgacg
ctggaagccatcacctcccaaagcataaaagtgacatggaaggccccactgaaacatctc
cagaatggcgtgatcaggggatatcaggtgtgccatcgagaacactccatcaacggcagt
caccagttcgtctgcattagtatggaggccacaggagagaccgagtccctgagcctcaac
aacttgaagaagttcacagagtatgaggtggtggtgcaagccagtaacagtgccggtccg
ggacctgcttccagtgaggtccgggcaacaacaatggaggacgtacccggcagagctcca
gagaaggttctggccactgccgcctcccctgaaagcatctctctgtcctggcagactcca
tccagggaagctcttaatggcgttctacagggtttccgcatcatcttctgggccaattta
ctagacggagaactgggggaaatcagaaatgtcactacacagaaggtcccgctggagctg
gagggtctggaaaaatacaccaactacagtatccaggtgctggccttcaccagagcagga
gacggggtgcgcagcgaccagatctacatccgcaccaaagaggacgtgccaggtccaccc
ggcggggtgaaggcagctgcagcctccagctctgtggtgtatgtttcttggctccctccg
ctgaagctgaatggcattattagaaaatacacagtcttctgttccagctcgtatcccacg
gtggtcagcgagtttgaagtgtccccggatgaattcctccaccgggttcacaatctcagt
cgcaacaggaagtacagtatctgggtgatggcggttactgcggccggccgggggaacagc
agtgatgtcatcaccgtggaacctctggctaaagctcctgccaaaatcctcacgttcagt
ggcactgttacaacaccttggatgagggatgttgttttaccctgcagggcggtcggagat
ccacctcctgccgtcaaatggctaaaagagagcgggagcccggcccctgcggtcattgat
ggaaggcgcagtatccatggaaatggcagcttcgtcattaaaactgtgaaagcagaggat
tctgggtattacacgtgtgtcgccagcaataactggggaacggacgaaataattctgaac
ctccaggttcaagtccccccagaccagcctcgtcttactgtgaccaagacaaccatcaca
tctattaccgtgacctggacaccaggagacaacggcgggagctccattagaggatatatt
ctgcaatactccgaggataacagtgagaagtggggaagtatttccattagtcctagtgag
cgttcataccgtctggagaacctcaactgtggcacctggtacaagttcacactaacggcc
cagaatgctgtcggcccgggccgaatcagtgagataatcgaagcgaagactcatgggaaa
gagccacagtactctaaagagcaggagctgtttactagcattaacggcacgtgcgtcaaa
ctcaacctgattggctggaatgatggtggctgtccaatcacttccttcactctggaatac
cgtccgttggacagccccgtgtggaccaaagccaagcgcacgtctcttacgaagagctac
aacctgctggacctacaggaagccacatggtacgaactgcagatgaaggtgtacaacagt
gccggactggctgagaaacgcgtcaaatttgctactctgaactacgatggtagcaccatt
cctccgctggtgaagactgcggtgaaggacccgattaagaaaacaagcaacgaggggatg
aagatgatggtgacgatctcatgcatcttggtgggaatggtgctgctcttcgtcctgctg
atggtgctgaggaggaggaggagagagcagaggctgaagcggctcagggatgcaaaaagt
ttggctgaaatgcttatgagtaagaacacaaggccttcagacaccatgaacaaacaacag
cagaccctccgcatgcacatcgacattccccgagcgcagctgctcatcgaagagagagac
accatggaaacagtggacgacagatcaacggtgctgttgaccgataacgatttcggagaa
actgccaaacagaagtcggccactgtcacgcactccgtccactatcagtctctgtcgcag
gccaccggcccgctggtggacgtctctgatgtccgacctgggacgagtaagagcagtctg
tcgaatcccacctctcgccgcacagctaaagctggtcctgctgcccgtaatcgctacgcc
agtcagtggacactgaatcgccctcacccccctgtctccgtccacactctcagcacggac
tggaggctgggaactcccagagtggccggatcggtggacaaggaaagcgacagctatagt
gtcagtccatcacaggacacagaccgggctcgcagcagcatggtctccactgagagcgcg
tcttctacgtacgaggagctggccagagcctatgaacatgccaagatggaggaacaacta
cgacacgccaagttcaccatcacagagtgtttcatctcggacacatcctccgagcagatg
accgccggcaccaatgattacacagacagtctaacatccagtacaccgtcagaatcaggc
atctgcaggttcactgcctcacctcccaaaccacaggacgtctgcagggtgataaacatg
gccgtacccaaggcccacagaccaggaggggagctcgtccacctgcctccgtacctgcgg
atggactttcttttgaaccggggtgtgtcgggaacttctcgtgaggcggcgatgggccag
gcctgtttggagccgcagaagacccgttcactgaagcgccccggcctgctggagccgacg
ccaatggaggtgccgaccagcagggacgtgcagcagtggcagccgggcacagcctccacg
cttccacagagagaggccggaacagacttggcacaggctgccaaaatcagcacctcccag
gaatcactgctggactccagaggacacttaaaacagaacaacaatccctacgcaaagtcc
tacacgctggtataa
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