Rhinichthys klamathensis goyatoka (western speckled dace): 130078789
Help
Entry
130078789 CDS
T09701
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
rkg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130078789 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130078789 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130078789 (tnpo3)
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
130078789 (tnpo3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
KAP122_middle
Motif
Other DBs
NCBI-GeneID:
130078789
NCBI-ProteinID:
XP_056100433
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MEGGKPTLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTAFYELPPETHTALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDVSSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTV
VTLLVSCAEKSGHNEKMLIKIFRCLGSWFNLGVLDNNFMANNQLLMILFQVLQRDETSTN
LHEAASDCVCSALYAIENVAINMPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEMTVRTPGQGMGDLRTLEMLLICAGHPQYEVVEISFNFWYRLGEHLYKMNDPA
LHRVFRPFIQRLLHSLARHCQLDPDHEGVPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLREGNPPWEVTEAVLFIMASIAKSVDPENNPTLTEVLEQIVLLPETVHLAVRYT
SIELVGEMSEVIDRNPCMLDPVLNFLMKGLREKPLASVAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTDAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLAQDS
SSGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEVPLHIWPVLSETLNAHQGDN
RIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEG
CRQGLLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSNIIIHI
IQCAIAATTLDHRDANCSVMKFIRDLIHTGVSNDHEDDFEVRKRLIGQAMEQHGLQLVTQ
LINTCCFCLPPYTLPDVAEVLWEIMLFDRPTFCRWLETALKGLPKETAGGAVSVTHKQLT
DFHKQVTSAEECKQVCWAIREFTRLYR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgggaaacccaccctgccgctggtttaccaggccgtacaggcgctatatcac
gacccggaccctgccggcaaggagcgcgcctcggtctggctgggagagctgcagagatcg
atgtacgcgtgggagatctcggatcagctcctgcagctgaagcaggacgtggaatcgtgt
tacttcgcagcccagacgatgaagatgaagatccagacggcgttctacgagcttccccca
gagacccacaccgcactgagagattcactcctgtctcacatccagaacctcaaagacctg
tctcccatcatcgtcacacagcttgcattggcaatcgcagatctggctcttcagatggcc
tcgtggaaaggctgtgttcacaccctcatagaaaagtacaataatgatgtgtcctctatg
cctttcctgattgagatactcacggttctgccggaggaggtgcatagccgctctctgagg
atcggagctaatcgacggacagagatcattgaagatctggcctactactctaccacagtg
gtcactcttctggtgtcatgtgcggagaagtccggacataatgagaagatgcttatcaag
atattccgatgtttggggagctggtttaatttaggagtgctggacaacaacttcatggcc
aacaatcaactgctgatgattctcttccaagtgctgcagagggatgagacgtctacaaac
ctgcacgaggcggcgtcagactgcgtgtgttcagcgctgtacgcgattgagaacgtggcc
ataaacatgcccctggccatgcagctcttccagggagtccttaccctagaaacggcctac
cacatggccgtagcccgagaggacctcgacaaggtgctaaattactgccgaatctttact
gaattgtgcgagacgtttttggagatgacagtaaggactcctggccagggcatgggagat
ctacgcacgttagagatgctgcttatttgtgctggacatccccagtatgaggtggttgag
atctcgttcaacttctggtaccgtctgggagagcatctttacaaaatgaacgatccagca
ctgcacagagtgttcaggccgttcatacagaggctacttcacagtctcgcccgccactgc
caacttgacccagaccatgagggagtcccagaggacactgatgattttggggagttcagg
atgagagtgtctgatcttgtgaaagatgtgattttcctagtcggctccatggagtgtttc
tcacagctgtattcgactctgagggagggaaaccccccatgggaagtaaccgaggctgtt
ctgtttatcatggcttccatagctaagagtgtcgatcctgaaaacaatcccaccctaacg
gaggtgctggagcagatagtattgcttcctgagaccgtccatcttgctgtccgctacacc
agcattgagctggttggagaaatgagcgaagtgatcgaccggaacccttgcatgttagat
cctgttttgaacttcctgatgaagggtttgcgggagaagcctttggcctctgtggcagct
aaagccattcacaacatctgctcggtgtgtcgagaccacatggcgcagcacttccagggc
ctgctggacatcgcccgctctctcgactcctttgccctgtcgacggatgctgccgttggc
ctgctgaaaggcacggcgctggtgttggcccgactccccctggagaagatcgcggagtgt
ctgagcgatttgtgtgcagttcaggtcatggcactgaagaagctgctggctcaggactcc
agcagtgggaagtcatcagaccccaccgtgtggctggacagactggctgttatcttcaga
cacacaaaccccattgtagagaatggacaaacacacccctgccagaaagtcattcaagag
gtacccttacatatctggccggtgttgtcagagacgttgaacgcccatcagggtgataac
cggatagtggagcgctgctgccgctgcctgagatttgcagtgcgttgcgttgggaaaggc
tctgcttctttattacagccactcgttacccagatggtgagcgtgtaccaggtgtaccct
cactcctgtttcctgtacctgggcagtattctagtggacgagtatggcatggaggaagga
tgtagacaaggccttttggatatgctacaggctctctgtatgccgactttccagctgtta
gaacagcctaatggactgcgcaatcacccggacacagtggatgatctttttagactcgcc
acaaggtttgtccagcgtagtccggtcacgttgctgagcagcaatattatcatccacatc
atccagtgtgccattgctgccaccaccctggaccatcgagatgccaactgcagcgttatg
aagttcatcagagaccttattcacacaggggtctccaatgaccatgaggatgactttgag
gtgcgaaagcgtctgattggccaggcgatggagcagcacgggctgcagctagtgactcag
ctgatcaacacctgctgtttctgcctgccgccttacactctgcctgatgtggcggaggta
ctctgggagatcatgctctttgatcggccgacgttttgtcgctggctggaaaccgcactg
aagggtcttccaaaagaaacagcaggaggcgctgtatcagtcacacacaagcagctcaca
gacttccataagcaggtcacaagtgcagaggaatgtaaacaggtttgttgggcgataaga
gagtttacaaggctgtaccgatag
DBGET
integrated database retrieval system
