Rhinichthys klamathensis goyatoka (western speckled dace): 130078838
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Entry
130078838 CDS
T09701
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu-like isoform X1
KO
K05693
receptor-type tyrosine-protein phosphatase mu [EC:
3.1.3.48
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130078838
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130078838
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130078838
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130078838
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130078838
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130078838
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Type II RPTP family
130078838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
fn3
MAM
ig
PTP-SAK
DSPc
I-set
Ig_3
Tc-R-P
Ig_2
PTPlike_phytase
Y_phosphatase3
C1orf162
V-set
TM_ErbB1
Fn3_PBP1
Motif
Other DBs
NCBI-GeneID:
130078838
NCBI-ProteinID:
XP_056100513
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MMANASGRFSGQKAQLFMPQFKENDTHCVIFQYYGAGREASSPGQLYIYVRENNSPLGVP
VWNASGPALQKWTQVELAVSTFWPNYYQLVFEMVASGERGLLAVRGISRQGHQCMNTPHF
LHIKGVEVNARQTATFQCTINGQPKDHVNYMLWLQGIGGREAPMKDTKPVNSRRYTGTFD
ILNTTKSDSGRYRCIVHSERGVGVSSYGALVVKQPPIPIAPPQLTAVGATYLWIQLNANS
INGDGPIVEKEVEYRTLSGSLIDNQPVDKPNHKIGHLDPDTEYEISVLLTRPNEGGTGAP
GPPLRARTKCADPMHGPRRLQVVDIKSRQFTIRWEPFGYNVTRCYSYNLTVQYRYTASAK
EETREEVCYDTPSVPPQHTIRSLPPYTNVSIRLLLRNREGVKESDELRVLTDEDVPGAVP
LESVQGSTFEEKIGLRWREPLQTYGVIKQYEIFYKAVSSFDPEFILTNQSGKVLKSSNET
THVFPGLYPGSTYSFTIRASTVKGYGPPVITQFTTKISPPRMPGYEQESPLNQSDSTVTV
LLKPARSRGAPVSVYQVVVEEERPRRSQRAAEILRCYPIPIHFQNSSGLNSQYYFSAEFP
SARIQAPMPFTVGDNRTYGGYWNLPLLPHKSYSVYYQAVSTANGETKIDCVRVATKAAII
VTQLTTPYVRIAPAAGDSQLTGAATRKPDAVEPEKHTDHTVKIAGVIAGVLLFVIIFLGV
VLVMKKRRSYHSYTYYLKLAKKRKETLSNTRQEMTVMVNSMDKSYAEQGTSCDEAISFMD
THNLNARPVSSPSSFTVKTNTLSTSVPNSYYPDPFVPTAILVPINDESQTMTSETSSLVQ
SHTHSYKKREALDVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQAAPW
DSAKKDENRMKNRYGNIIAYDHSRVRLQPLDGEQSSDYINANYVDGYHRPNHYIATQGPM
QETVYDFWRMIWQENTATIVMVTNLVEVGRVKCCKYWPDDTEIYRDMKVTLIETQLLSEY
VIRTFAVEKRGAHEIREIRQFHFTGWPDHGVPYHSTGLLGFIRRVKAKSPASAGPMVVHC
SAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEAC
LCGDTTIPANQLRSVYYDMNRLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHE
KNRCMDVLPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLV
LDYHCTSIVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNAAR
PQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVEKWQEEYDGGEGRTVVHCLNGGGR
SGTFCAISIVCEMLRHQHSVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNSG
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaacgcctctggaaggttctcgggacagaaagctcagctcttcatgccccag
tttaaggagaacgacacacactgcgtcatattccagtattacggtgcgggtcgagaggcg
tccagccccggccagctctacatctacgtccgggagaacaacagtcctctgggagtgccg
gtgtggaacgcgtccggtcccgccctgcagaagtggacccaggtggagctcgccgtcagc
accttctggcccaactactaccagctggtgttcgagatggtggcgtctggggaacgaggt
ctgctggccgtcagaggaatctcccgtcagggtcatcagtgcatgaacacgcctcacttc
ctgcacattaaaggtgtggaggtcaacgccagacagacggccacgttccagtgcactatt
aacgggcagcccaaagatcacgtcaactacatgctctggttacagggcatcgggggccgc
gaggctcctatgaaggacacgaaaccggtgaactccagacgctacaccggcaccttcgac
atcctcaacaccacgaagagcgactcaggccgataccggtgcatcgtccactcagagagg
ggtgtgggagtgtccagctacggggcgctggtggtcaaacagcctccgattcccatcgct
cctcctcagctgacggccgtcggcgccacctacctgtggatccagctcaacgccaactcc
atcaacggagacgggcccatcgtggagaaagaggtggagtaccgcactctctccgggagc
ctgatcgacaaccagcccgtggacaaacccaaccacaagatcggccacctggaccccgac
accgagtacgagatcagcgttctgctcaccagaccgaacgagggcggcaccggagcgcca
ggacccccgctgagggccagaaccaagtgtgcagatcccatgcacggccctcggagactc
caggtcgtggacatcaagtccaggcagttcacgatccgctgggagccgttcggatacaac
gtgacgcgctgctacagctacaacctgacggtgcagtaccgctacacggccagcgctaaa
gaggagacgcgcgaggaggtgtgttacgatacgccgagtgtgccgccgcaacacaccatc
cgcagcctcccgccgtacaccaacgtcagcatccgactgctcctgcgcaaccgcgagggc
gtgaaggagagcgacgagctgcgagtgctgaccgacgaggacgtgcccggcgccgtcccg
ctggagtcggtccagggaagcacgtttgaggagaagatcggcctccgctggagagagccg
ctgcagacctacggggtcatcaagcagtacgagatcttctacaaggccgtcagctccttc
gaccccgagttcatcttgaccaatcagagcgggaaggtcctgaagtccagcaacgagacg
acacacgtgttcccgggcctctatcccggatccacgtactccttcaccatcagagccagc
actgtgaagggatacgggccgcccgtcatcacgcagttcaccaccaagatctcacctccg
cgtatgccgggatatgagcaggagagtccgctgaaccagagcgacagcacagtgacggtt
ctgctgaagccggcccggagtcgaggagcgcccgtcagtgtgtatcaggtggtggtggag
gaggagcgtccccgtcgttcccagagagctgctgagatcctgcgctgttatcccattccc
atccacttccagaactcgtccggtctgaactcccagtactacttcagcgctgagttcccc
tcggcccggatccaggcgccgatgcccttcaccgtcggggacaaccggacctacggcgga
tactggaaccttccgctgctcccgcacaagagctacagcgtctactatcaggccgtcagc
acagccaatggggaaactaagatcgattgtgttcgtgtggccactaaagctgccattatt
gtgacacagctcaccacaccatatgtgcgaatcgcacccgctgccggcgacagccaacta
acaggtgctgcgacccgtaagcctgacgccgtggagccggagaaacacacggatcacacg
gtgaagattgcaggagtcatcgctggagtcctgctcttcgtcatcatcttcctcggtgtg
gtgctggtcatgaagaaacgaagatcctatcactcctacacttactacctgaaactggcg
aagaagcgcaaggagacgctgagcaacacgaggcaggagatgacggtgatggtgaactcc
atggacaagagctacgccgagcagggcaccagctgtgacgaggccatctccttcatggac
acacacaacctcaacgcaagacctgtgtcgtcgccgtcctcgttcaccgtgaagactaac
acactgagcacatccgtgccgaactcctactatccagacccgtttgtgccgaccgccatc
ttagtgcccattaatgatgagagccagacgatgaccagcgagaccagcagcctggtgcag
tcacacacacactcctataagaagcgcgaggcgctggacgtgccgtaccagaccggacag
ctgcacccggcgatccgagtggccgatctcctgcaacacatcacacagatgaagtgtgcc
gagggctacggcttcaaggaggagtacgagagcttcttcgaaggacaggcggcgccgtgg
gactcggccaagaaggacgagaaccgaatgaagaaccgttacgggaacatcatcgcatac
gatcactcacgtgtgcgactgcagcctctggacggagagcagagctccgattacattaat
gctaattatgttgatggctaccatcgaccgaaccactacatcgccacacaaggcccgatg
caggagaccgtctacgacttctggaggatgatctggcaggagaacaccgcaacgatcgtc
atggttaccaatctggtcgaggtcggccgggtgaagtgctgtaagtactggcctgacgac
actgagatctacagggacatgaaggtgacgctcatcgagacgcagcttctctcggaatac
gtcattcgaaccttcgctgtggaaaagcgaggagctcatgagatcagagagatccggcag
ttccacttcaccggctggccggatcacggagtgccgtatcactccacgggtctgctggga
ttcatccgccgggtcaaagccaagagtcctgcgagcgcggggccgatggtggtgcactgc
agcgctggagccggacgcaccggatgcttcatcgtcatcgacatcatgctggacatggcg
gagcgagaaggagtcgtggacatttacaactgcgtcagagaactgcgctctcgcagggtt
aacatggtccagaccgaggagcagtatgtgttcatccatgacgccatcctggaggcgtgt
ctctgtggcgacaccacaatcccggccaatcagcttcgctcggtgtattacgacatgaac
cgcttggacccgcagaccaactccagccagatcaaggaggagttccggacgttgaacatg
gtgacgccgacgctgcgcgtggaggactgtagcatcgctctgctgccgcggaaccacgag
aagaaccgatgcatggatgtccttcctcctgaccgatgcctgcccttcctcatcaccatc
gacggcgagagcagcaactacatcaacgccgcgctcatggacagctacaagcagccgtcg
gcgttcatcgttacccagcatcctctgcccaacaccgtcaaggacttctggcggctggtg
ctggactatcactgcacatctatcgtcatgctgaacgacgtggaccctgcgcagttgtgt
cctcagtactggcctgagaacggtgttcaccgccacggcccgatccaggtggagtttgtg
tcggcggatctcgaggaggacattatcagcaggatcttccgcatctataacgcggcgcgg
cctcaggacgggtaccggatggtccagcagttccagtttctgggctggccgatgtaccgg
gacactccggtgtccaaacgctcgttcctcaaactcatccgacaggtggagaaatggcag
gaggagtacgatggaggagagggaaggaccgtcgttcactgcctgaacggtggcggacgc
agcgggaccttctgtgccatcagcatcgtgtgtgagatgttacgacaccagcactcggtg
gacgtgttccacgccgtcaaaacactgagaaacaacaaacccaacatggtggacctcctg
gatcagtacaagttctgctatgaagtggctctggaatacttgaattctgggtaa
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integrated database retrieval system
