Rhinichthys klamathensis goyatoka (western speckled dace): 130079345
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Entry
130079345 CDS
T09701
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130079345
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Other basic domains
RF-X
130079345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
130079345
NCBI-ProteinID:
XP_056100559
LinkDB
All DBs
Position
Unknown
AA seq
1560 aa
AA seq
DB search
MKLTVMADDQQQQPGVPGVPGPSLQSLEATALQYNKIKNSICKSVQSKVESILQDVEKFT
DIEKLYLYLKLPSGPSGGNDKRTENQRGSASPAICDQNSMSSSRTQQTYAFNWIRNHLEE
HPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSG
LRKKAFVHMPSLPNLDIHKSGDGCELLESAGQSPSAEDEMRSAACGLVCEWAQKVLSRQF
DSVEELARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTSAFVPTGEANSFLPQVKTLPSP
SVDAKQQLQRKIQKKQQEQKLTSPLPTDAQVRRAEAGTPVPGSSLTSGSPALLSPQPTIG
IVVAAVQSPITVQRSRQLMTSPSPVGAAEGKVVPVNFQVVTQSLKQSPKTPQNISASPVG
DRLARHRYAQILPKPSATSAIALRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAISLAP
NSSSNSSTPTPLRPASAGISSTASQEEFNQTQQAHNGASAISLQSSGFGKPGRPSITPTP
LASTITNEVKVTFEAVNDNNSAISVDKQSTASGASTGQKNERATKYRASSEPSLLIKASP
VPERVIRAKSDSSTPSSTIMEALAPSSNNNSNDQPESTLYLTVTSQNVDAELSSICAVAT
ASTSSKDAGLCLKSPRKRSASVLETHTIPVKRVFISQQPLDVSSNARPGLVISAKKIQRP
GTPARPESAPCKVTLKHSSSFPTQILALSDTPIGISRTVNPRIENEVADISLNETASGNS
TALLQQIPSHHQISSVVSQEVSAVSELKSSLQDFSQQMQAEHKQNAANPLPLMATETSSQ
LSLQQDIVDFAGAQASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLSCVDISL
QGQATVGQGTILSPHQTSTQFYHSSHSSATPVHTPTPTPTPTPTPTPTPTSEMLPGGNSM
TRESPCSRMATVTPVDSILGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGY
HDGSVVSSSPVKPMQRPMATHPDKAKLEWITNRYNSTAGSPVISTNSTIAILPSYQDLVE
DHFRKPHAFAIPGQSLQSQSRHQDGNFGRLTAVSPVQQGQQTTLSSRQESFAVPAPLDNK
GAGSTSASGTFRCRSVSPAVRQRNLSGTTAQTVTTPRSVVSPFNCPLTSEVLNILANNQS
VVSASTLAQRSQSVPLNIMMQSELLPVSHQAQQSNSAKITTVLLSKMDTDGDDAVRGLGV
NNLPSNYTARMNLTQILETTQGFPGGPNPQNQQLPLDSSPSPFDFQKTGYLISTGEEQVV
FSSGDSQAQSGSGLQQPEEQLELQEPELELQDQHLQLENQQLQLPDQQLQLQDQQLQLQD
QQMQLQDQQLQLQDQQLQLQDQQLQLQDQQLQLSDQQQLQDDPDLTRQHLLPQTSQQVVD
HEHQEQLDFNTTVKDLLGEDSLNPSSQLVGQVASELSAVASDFSSDIRLTSDLSSSINDL
NTLDPNLLFDPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtgatggctgatgatcaacaacaacagcccggtgttcccggtgttccc
ggaccgtccctgcagagcctcgaggccacggcactgcagtacaacaagatcaagaactcc
atttgcaaatctgtacaatcaaaagtggagagtatattgcaagatgttgagaagtttaca
gatatcgaaaagctctacctctaccttaagttgccttctggtcccagtggtggcaatgac
aaaagaactgaaaatcagaggggctctgcaagtcctgcaatatgtgaccagaattcaatg
tcgtccagtcggactcaacaaacatacgcgttcaactggatccgaaatcacttggaagag
catccggaaacctcattgccaaaacaagaggtgtacgacgagtacaagagttattgcgac
aatctgggataccatcctttaagcgcagctgatttcggaaagatcatgaaaaatgttttt
ccgaacatgaaggcacgtcgtttgggcatgcgggggaaatcaaagtactgctatagtggt
ctgaggaaaaaagcatttgtgcacatgccgtcgctcccaaacctggacatacacaaatct
ggagatgggtgcgagctgttggagtcggccggacagtctcccagtgccgaggacgagatg
cgatctgctgcctgtggtctggtctgcgaatgggcccagaaggttctgagtcgccagttt
gacagtgtggaggaactggctcgctttcttcttaacagtcactatataggcactaagtcc
atggcagctcttactgttatgactggaaccccaacaggtatgaaaacccctacgtctgcg
tttgtgccaaccggtgaagccaactcattccttccccaagtgaagaccctcccgtcgcct
tctgtagacgccaaacagcagcttcagcgtaagatccagaagaagcagcaggagcagaag
ctcacctctcccttgcccaccgatgcccaggtgagaagggccgaggcgggcacacctgtc
ccggggtccagcctgacctctggaagtcctgcattactgtcccctcaaccaaccattggc
attgtggttgctgctgttcaaagtcctatcacagttcagagaagcaggcaactaatgacc
tctccaagtcctgttggggcagcagagggaaaagttgtaccggttaacttccaggtcgtg
acacaatctcttaagcagtctccaaaaacaccccagaatatctctgccagcccagttggt
gaccggttggccagacaccgatatgcccagatcttacctaaaccttccgccacaagcgcc
attgcacttcgctcacccccaacgctcttaatcaccaacagccccatcaagacagtgatg
cccacgcctcatgttagctctgtaaatgtggtcaagatgactgcaatatcgctagcgccc
aacagtagcagtaatagtagtactcctaccccgttgcgacctgcatcggcaggcatcagt
agcacagcttcccaggaagaatttaaccaaacccagcaagctcataacggggcgtctgcc
atctctcttcagtcatctggatttgggaaacctggacggccttctataaccccaacccct
ttagcgtccaccattaccaatgaggtaaaagtgacattcgaagctgtgaatgacaataac
tcagctatttctgttgataaacaaagcactgcgtcaggggcaagtacaggacaaaagaac
gaaagagccactaaataccgggcttccagtgaaccctctctgcttattaaggcgtcccct
gtgcctgagagagttataagggccaagagtgactcttcaaccccttcaagtacaatcatg
gaggctcttgccccaagcagcaataacaacagcaatgatcaaccagaaagtactttgtat
ttaactgttactagccagaatgtagacgccgaattgtcatccatttgtgcggtggcaact
gcaagcacttcttctaaagatgctggtctctgtctaaaaagccctcgaaaacgctctgca
tctgttttggaaacccatacaatcccagttaaaagagtattcatttcccagcaacctttg
gatgttagcagcaatgccaggcctggtcttgtaatatcagctaagaagatccagagacct
ggcaccccagcaagaccagagagcgctccatgcaaagttacgctaaaacacagtagctct
tttccaactcaaatcttggctctttccgacactcccattggaatctctcggactgtaaat
cctcgaatcgagaatgaagttgctgatatcagcctgaatgaaacagcttctggtaatagc
acagctttattgcagcaaatcccaagtcaccaccaaatcagcagtgttgtttctcaggag
gtatccgctgtcagtgagctcaagagctcgctgcaagacttctcgcaacagatgcaagcg
gaacacaagcagaacgcagctaatccgttaccattgatggcaactgagacctccagtcag
ctctctcttcagcaggacattgttgattttgcaggagcccaagctagcattgactatttc
cccttcaatgatgatgatatgacccaggatagtatcgtagaagagctcgtacagatggag
gagcaaatgaagctgaatagcagcttgcaatcctacctaagttgtgtggatatatcccta
caaggtcaagccacagttggacaaggaacgattctttcgccccatcagacaagtacccag
ttctatcattcctcccatagtagtgcaacgccagtgcacacgccaactccgacgcctacg
ccaacaccaacgcctactccaactcctacctccgagatgctaccaggggggaatagcatg
accagggaaagcccttgttcccgaatggcaactgttaccccggtggatagcatcttaggt
gggcgccatacacccatcagcactccactgtcaaactgcagtagcagtgttcctccaagt
cccattgaatgccgcaatccctttgcattcactcctatcaactccagtataactggttat
catgatggtagtgttgtgtccagcagtccagtgaagcccatgcaaaggcctatggccacc
caccctgataaagccaagctggagtggatcaccaaccgttacaacagcaccgcgggctct
cctgttatctcaaccaactccaccattgctatcctccccagttaccaggatctggtcgag
gaccatttccgtaaaccacacgcctttgccatcccaggccaatctctccagtctcagtca
aggcatcaggatggaaacttcggaaggttaacagccgtttctccagtgcaacaaggacag
caaaccacccttagtagcaggcaagaaagtttcgccgtcccagctccgttggacaataaa
ggggccggaagcacatccgcatctggaaccttccggtgtcgtagcgttagcccggcagtt
cgccagcgtaacctcagtggcaccactgcacaaacagtcaccacccctcggtctgttgtt
tctccctttaattgccccctgacatctgaggtccttaatattctggccaacaaccagtcg
gtggtcagtgccagcaccttggcccaaaggagccaatcagtgccgctaaacatcatgatg
cagtctgagctgctacctgtcagtcaccaggcgcagcaaagcaatagcgctaagatcaca
accgtgctcctcagcaagatggacacggacggagacgatgcagtgcgaggacttggtgta
aataacctgccctccaattacaccgcacggatgaacttaacccaaatcttggagacgaca
cagggcttccccggaggccccaaccctcagaaccagcagctgcctctggactcaagccct
tcgccatttgacttccagaagacgggttacctcataagcacgggagaggaacaagtcgtc
ttctccagtggcgacagtcaagcacaatcaggctctggactgcaacaaccggaagagcag
cttgagctccaagaaccggaattggagctgcaagatcaacacctacagctcgagaatcaa
cagctgcaacttccagatcagcaattacaactccaagaccaacagttgcaactccaggac
caacagatgcaacttcaagaccaacaattgcaactccaggaccaacaattgcaactccag
gaccaacagttgcaactccaggaccaacagttgcagttgtcagaccaacaacagttacaa
gatgatccagatctcacccggcagcacttgttgccccaaacctctcagcaggtcgtggat
cacgagcaccaagagcaactggacttcaacactaccgtcaaggatctcttaggggaggac
agcctcaaccccagttcacaactcgtcggacaagtggcgtcagaacttagtgcggtcgcc
tctgacttttccagcgatatccggttgacttctgacctgtctagtagcattaatgacctg
aacactttggaccccaacttgctgtttgaccccagtcaacagcaggaccaatatgaagat
gccacactggaagaactgaagaacgatcctctgtttcagcagatttgcagcgatactgtg
aattctgctggttttgattggctggagaataaagaccagccaaccgtggaaatgttggga
taa
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integrated database retrieval system
