Rhinichthys klamathensis goyatoka (western speckled dace): 130079360
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Entry
130079360 CDS
T09701
Symbol
shank2a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
SAM_1
SAM_2
Ank_3
Ank_5
SH3_2
PDZ_6
SH3_9
SH3_1
PDZ
FERM_f0
PI3K_rbd
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
130079360
NCBI-ProteinID:
XP_056100575
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MPRSPTSSEEEMAQSFSDSSQDSSSHSSREEAVYETVRAERPDSLTTDTQNNSLTVRVFI
PDLQQTESMRFNPGDTVWAAKRRILCTLSQNLKDVLNYGLFHPASDGRDGEFLDEESLIG
EHPLPACEGVPSLEFRYKTRLYNQSSVDEKQIARLHTKASLRKFMDYIQNHELEKFSRML
DRGLDPNYQDTETGETPLTCVAQLENKLEFIKALRNGGAHLDFRDKDGMTALHKAARAKN
QPALKTLLELGASPDYRDSRGLTALYHTVLADGDTHTDCCELLLNQHASVCCQDENGWHE
IHQACRHGLVQHLEHLLFYGADMSAQNASGNTALHICALYNQEKCTHVLLVRGADKEVKN
HISQSPFQVAIISGNFELAELIKNHRESDVVPFSEASSFSRQRLLQKNRSLSVSRLLLRS
NSDNSLPARAVSPEQRAALSLSPQKMLRDPSARVKMVTGRSGRTVPSSRSLSISLEDEHS
TQLKCANGRACVQSGRRKMYSAVPGRRFVAVRSYLPQAGGEISLHKNERVRVLSVGEGGF
WEGNCRGQVGWFPARCLEEIPVKPDKERPKSGMERNDKKRLFRHFTVGSYDSADSECVTE
QKTVVLQKQDNEGFGFVLRGAKADTPIEEFIPTPVFPALQYLESVDEGGVSWLMGLRTGD
FLLEVNHQNVVKMGHRQVVNMIKHGGNRLVIKVVRVSRNPEQDDKTRKKAPPPPKRAPTT
ALSMRSKSMTSELEELDKVEETAHLQKPANGKTSAVATIKPRPSSRFSAACMDVTQSTSE
RPGVAIVPPNVPGRSQGSYIRVPKSSMKRQKSIGIAGEEKKLLIPPLLKFTRSLSMPDTS
EEIPPPPGISPPSPPYNPSTPMRYEPNQSIYTQSSTGRCHTIERDQVVYHRQNFEQYDYQ
TYPASQQNMCTHNKAHVPENPYSDIAGKLLYVPPKPARRKGILIKQPNVEDSSDKTCSIQ
IPTIIVKEPSTSSSGKSSREGSMEIETPTSEPTGQLRPEDTGGFTVSNPFAAAIAGAVRD
REKRLEARKNSHAFLSMDLGDEDSSIPTPRLRQSMSIDEGMFAFDKSLEKRMAPPAPLLG
FQRIRSGGNMTDFTLPEPTTEPFTTRTGNCPNTGSPITLNDGDFQHQARNRALKQQVQPP
LPPPKGESRKANLNQPLFIDTKLRSNIEASFVATAQPKDCGGLFRHTRESNHATKAAKER
NPSEQLKNSYSTSQQQSEGLLMVHTLDKTKPQVNSQSDGFKQEESLVMGSATIDCNDKLI
APNSQPSHTRTSATSVEKPANFSCSIPLPPLNSVDFDEEFDLPEPFPPPLEFANSIDVPE
DQVAEILKQKKSHATRGPLPVYHSHASTMNSVESKCLPGLVNCMNPHTYPPPPPESFEPV
TDSGIEEVFGRNSGDPHFEANSTISTMSSVYTLSFEGLEDSYIAYVDGQTLVERPPVPPK
PKMKPIINKSNALYRNSLMEESIESFGRPPPPPPPWDGVAQSEPHKALDQRGSKLGGDAH
ELPNPLLPNADPKVNVISELSSKLQQINKDRFPKRGPLDPPAGSRSIGSREWMTQASGAK
HSNTVASSSTTHLPPQAAGPPESGRSSSLPVSAGSPTLRDAFSLPSPPVVNAEQCHSLSS
VSSQSLSPLTLLQAAADKPFADKPVLVWTKHDVADWLESLNLAEHKKTFLDNEIEGTHLP
NLQKEDLVDLGVTRVGHRMNIERGLKLLMDR
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagcccgacgtccagcgaggaagagatggcccagagtttctcagactcttct
caggactccagctcacacagttcccgagaggaggccgtctatgagaccgtacgagcagaa
cgacccgacagtctcacgacagacacccagaacaactcgctcaccgtgagggtgttcatc
ccagacctgcagcaaacggaaagcatgaggtttaaccccggtgacactgtgtgggctgct
aaacggcggatcctgtgcactttgagtcagaatctgaaggatgttctgaactacggcctc
ttccatccggccagcgacggcagagacggggaattcctggatgaggagagtctgatcggg
gaacatccactgccggcctgcgagggcgtcccgtcactggagtttcgctacaaaaccaga
ctgtacaatcaatccagtgtggatgagaagcagattgccagacttcacacgaaggccagc
ttgaggaagttcatggattacatccagaatcatgagttagagaagttctccagaatgcta
gacagaggactggacccaaactaccaggacacagagaccggagagactccactcacctgt
gtggcgcagctggagaataagctggagtttattaaagctctgaggaatggaggagctcat
ctggacttcagggataaagatggcatgacggctcttcataaagctgctcgcgctaaaaac
cagccagcgctcaagactctgctggagctcggcgcgtctccggactacagagacagtcgt
ggtctgacggcactgtatcacacggtcctggcggacggagacacacacaccgactgctgt
gagctgctgctgaaccagcacgcctccgtctgctgccaggatgagaacggatggcatgag
atccaccaggcttgtcgacacggtcttgtccaacacctcgagcatctgttgttttacgga
gcagatatgagcgcacagaacgcctcgggaaacacggcgctgcacatctgtgctctgtac
aaccaggagaagtgcacacatgtgctgctggtcagaggagccgacaaggaggtgaagaac
cacatcagccagagtccgttccaggtggcaatcatctctgggaatttcgagctggcagag
ctcattaagaaccacagagaaagtgatgtggtgccgttctccgaggcctcgtccttctcc
agacagcggctcctgcagaagaaccggagtctgtcagtgtctcggctgctcctgcgctcc
aacagtgacaacagtctgccggcgcgagccgtgagtccagagcaacgggccgctctcagt
ctgtccccgcagaagatgctgagagacccgagcgctcgcgtgaagatggtgacgggtcgc
agcggcaggaccgtcccgagcagccgctccctgtccatcagcctggaggacgaacacagc
actcaactcaagtgtgccaatggccgagcgtgtgtgcagagcggcaggaggaagatgtac
agcgccgttcccggccggcggttcgtggcggttcgctcatacctccctcaggctggcgga
gagatcagcctccacaagaacgagcgggtcagagttctcagtgttggtgaaggaggattc
tgggaaggcaactgtcgaggtcaggtgggctggttccctgcgcggtgtttggaagagatt
cctgtcaagcctgacaaagagagacccaagagcgggatggagaggaacgataagaagagg
ctgttcagacactttactgtcggctcctatgacagcgctgacagtgagtgtgtgaccgag
cagaagactgtggtgttacagaagcaggacaacgaaggcttcgggttcgtgcttcgagga
gctaaagccgatacgccgatcgaggagttcatccccacaccggtgttcccggcgctgcag
tacctggagtctgtggatgagggcggtgtttcctggctgatggggcttcgcaccggggac
ttcctgctcgaggtcaatcatcagaacgtggtgaagatggggcatcggcaggtcgtaaac
atgattaaacacggaggaaaccgactcgtcattaaagtggtgcgagtcagcaggaatccg
gagcaagacgacaaaacccggaaaaaagctcctcctccacccaaaagagctccaacaact
gcactctcaatgagatccaagtccatgacatctgaactggaagaactagataaagtggaa
gagactgcgcatctgcagaaaccagcgaatggaaaaacctcggcagtcgcgactatcaag
ccccggccctccagtcgcttttcggccgcatgcatggatgttactcagtccacatctgaa
aggccaggagtcgctatagttcctcctaatgttcctgggagatcccaaggaagttacatt
cgtgtgccaaaaagctccatgaaaagacaaaaatccattggaatcgcaggagaagaaaag
aagttactgatacctccactgctgaagttcaccagaagtctctcaatgcctgacacatct
gaggaaattcccccacctccaggcatctctcctccatccccaccttacaaccccagtact
cctatgagatatgagcccaaccagtccatttacacacagagctcaacaggcagatgccac
accatagaaagagaccaggtcgtgtaccatcggcagaactttgaacaatatgactatcag
acttatccagccagccagcaaaacatgtgtacacataacaaggcccatgtgccagagaac
ccatactcagacatagctggcaaacttctgtacgtcccaccaaaaccagcccgcaggaag
ggtatactgataaagcagccaaatgttgaggatagctctgataaaacctgttcaatccag
ataccaaccattattgttaaagagccttcaactagcagtagtggcaaaagtagccgagag
ggtagcatggaaattgagactcccacttctgagccaaccggccagctacgaccggaggac
accggagggttcaccgtgagcaacccttttgcagctgctattgccggggccgtacgtgac
cgcgagaagcgtcttgaagcacgcaagaactcccatgcctttctgtcaatggatctcgga
gacgaggattcatctatccccacccctcgtttacgccagtctatgtccatagatgaaggc
atgtttgcttttgataagagtttagaaaagcgtatggctcctccggctcctttattaggg
ttccagcgaattagaagtggaggcaacatgacagactttaccctccccgaaccaacaact
gagcccttcacaacacgcaccgggaactgccccaacacaggcagtcccattactctcaat
gatggagatttccaacaccaggccagaaatagagctctgaagcagcaagtgcaaccccct
cttcctccacctaaaggagaatctcgcaaagcaaacctcaaccagccactcttcattgac
accaagctacggtccaatattgaagccagctttgttgccacagctcaaccaaaagattgt
ggaggtttgtttaggcacacaagagagtccaatcatgccacaaaggcggcgaaggaacgt
aatccatctgagcagttgaagaacagctatagcacatcgcaacaacagtcagaggggctc
ctcatggtccacacactagataagaccaagccacaagtgaacagtcagtctgatggattc
aaacaagaagagtccctggttatgggcagtgcaaccattgattgcaatgacaaacttata
gcccccaactcccagccatctcatacaaggacctctgccacatccgtggagaagcctgcc
aacttctcctgtagcattcctcttcccccactgaactcagtggattttgatgaggagttt
gacttgcctgaaccctttcctccacctctggagtttgccaacagcattgatgttcctgag
gaccaggttgcagagatcctcaagcagaaaaagagtcatgcaacaaggggacccttgcct
gtttatcattctcatgcttctacaatgaacagtgtggagtccaagtgtcttccagggctt
gtgaattgcatgaatccccacacctaccctccaccacctccagagagtttcgagcctgtc
acagactcaggcattgaggaagtttttggtcgaaacagtggggatcctcactttgaggca
aacagcacaatttccacaatgtccagtgtctatactctttcatttgagggacttgaggac
tcatacatagcctatgtagacgggcagactctggtggagcgaccgccggttccaccgaag
ccaaaaatgaagcccataatcaacaaaagcaatgcactttacaggaactctttgatggag
gagagcatagagtcgtttggacggccaccaccacctcctccaccctgggatggtgtagcc
caatctgagccgcacaaagcgcttgatcagcggggctctaaactggggggagacgcccat
gagctcccgaaccccctcttacccaatgcagatcctaaagtcaatgtgatcagtgaactc
agttctaaacttcaacagatcaacaaggacagatttccgaaacggggacctctcgaccca
cctgcaggatccagaagcatcggatcaagagagtggatgacccaagcctcaggtgccaaa
cacagcaacacagtggcttcttcctcaactacacacttgcctcctcaggctgccggtcct
cctgaatcgggtcgcagctcttctctgccagtctctgccggctctcccacattaagggat
gcgttcagcctgccgtctccacccgtagtgaacgcagagcaatgccacagcctcagctca
gtcagcagtcaatcgctgtccccactcacgctgctccaggcggctgccgacaagcctttt
gctgacaaacccgtcctagtctggaccaagcatgatgtagccgactggctggaaagcctg
aacttggcagaacacaagaagaccttcttggacaatgaaattgagggcacccaccttcct
aacctccaaaaagaagaccttgtagacttgggtgtcacccgtgttgggcaccggatgaac
attgagaggggtctcaaactgctaatggacagataa
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integrated database retrieval system