Rhinichthys klamathensis goyatoka (western speckled dace): 130079387
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Entry
130079387 CDS
T09701
Symbol
sox8a
Name
(RefSeq) transcription factor SOX-8a
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130079387 (sox8a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130079387 (sox8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130079387
NCBI-ProteinID:
XP_056100606
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MSKEPDKTSSGTESSFIGDADSDSPSSPSVSDEQGARTSTGERADSEEDARFPPCIRDAV
SQVLKGYDWSLVPMPMQGIRSLKDKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSK
TLGKLWRLLSESEKRPFVEEAERLRVQHKKDYPDYKYQPRRRKSLKPGQGELDPGAEKSH
HPSDHMYKMEAGVRGMHSHGVQAHGPPTPPTTPKSDQHHSAKRATENTRQNIDFSNVDIS
ELSSDVIGSMGPFDVREFDQYLPLNGPSENNGFSVSYHHHGTVPAWNKPSGSPSTSSHNH
PRPLIKTEQLSPSHYGESHGSPTQSELSDCPDMQNSTYFTTFSGYPAGIYQYPYSHFSRR
PYVTPVLNSLSSPSHSPGANWEQPVYTTLTRP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggagccggataaaactagttctgggactgaaagctcttttattggagatgca
gactctgattcaccgtcttctccatccgtgtccgatgaacaaggcgcgcgaaccagcacc
ggcgagcgcgcggacagcgaggaagacgcgcgcttcccaccgtgtattcgagatgccgtg
tcgcaggtcctcaaaggctacgactggtccctggtgccgatgccgatgcagggaatccgg
tctctgaaggacaagccgcacgtgaagagacccatgaacgcgtttatggtgtgggcacag
gcggcgcgcaggaagctcgcggatcaatacccgcatctgcacaacgccgagctcagcaag
accctgggcaagttatggaggctgctctccgagagcgagaagaggccgtttgtggaagag
gccgagagactgcgagtccagcacaagaaagactatccggattataagtaccagcctcgg
agacggaagagcctgaagccgggtcagggtgaactggacccgggagctgagaagagccat
catccctcggatcacatgtacaagatggaggcgggagtgagagggatgcacagtcatggt
gttcaagcacacgggcctccgacgcctccaaccaccccgaagtccgatcagcatcacagc
gcgaagcgtgcgacggaaaacacacggcagaacatcgacttcagcaatgtggacatttct
gagctcagcagcgacgtcatcggcagcatgggcccgttcgacgtgcgtgagttcgaccag
tacctgccgctaaacggcccgtccgagaacaacggtttcagcgtgtcctatcaccatcat
ggcaccgtcccggcgtggaacaagccgtccgggtcaccgtccacatcttcacataaccat
ccacgaccgctcattaaaactgaacaattgagtccttctcattacggagagtctcacggg
tcgccgacccaatctgaactgagtgactgtcccgacatgcagaactcgacgtacttcacc
acattttccgggtatcccgctggcatttatcaatatccgtactcccatttctccagaagg
ccgtatgtgactccggttctcaacagtttgtccagtccatctcatagtcccggtgcaaac
tgggagcaaccggtttacacgactttaacgcggccctga
DBGET
integrated database retrieval system
