Rhinichthys klamathensis goyatoka (western speckled dace): 130079419
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Entry
130079419 CDS
T09701
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130079419 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130079419 (tpra)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130079419 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
DUF7089
Motif
Other DBs
NCBI-GeneID:
130079419
NCBI-ProteinID:
XP_056100659
LinkDB
All DBs
Position
Unknown
AA seq
2351 aa
AA seq
DB search
MAALLQQTLERSEINKLPKAIQNKLEKVLSEQQTEIDLLKSQYERYKADCEQQYFNLEKK
LAESHEQFLSQSKEYHSIKEENIRLTEELKKLKDVEEEQGTTQESTPPRAKYEIEAENRE
LSRLLEKRSQEVENLSEDLKRLNDKLAETSTIKMELQLKLDELQSSEVSIQHREKRMEQE
KELLQNQNTWLNSELKSKTDELYTVFRDKGKEVLELRCSFETKKEEVTRLQDQVNTLKKN
NDNMQKSTENLMNKLKEAKEQRASMEEKYRNELNANLKLCNLYKNAAADSEAKNAELNRA
VEELNKLLKETMEANKGTEKKLSELQGVREKAESDLHEKVRNLEKELENSNTRLADFKRR
GVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLESKRVNKVLDE
IVLEVENKAPILKRQREEYENMQKSMSSLCAKLEQAMKEVHRLQKVTDEANKRALGLERD
NQRSKRQLADMSEQVSVLLVEVEEARGNQVVREDLSSAVSSSSEVQGSRQVAFRSVQELQ
QQNQNLLAQIRDLEEQRERDQNQAKTARQTEMDQSLEKVQKELEQIKDQQNHQKQLADSA
IRQRDMYRILLQTAGVELPPQGLEAGSQSTTPSRSGPMSTRSTPLRSAASESVQATQAKA
ALKQLNDAFTTYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSSQLEFAFKRYEMLQE
NVNGFQREIEALREKNQKMNATHQRHEQIIHTMTQDLREANEKLTMAELRVENIRKERDI
LRQVENRLSQEKESVLTEQRGQNLLLTNLKSIQLFMERSETETKQRYNNQTQHLEKEIIQ
LKKKLEQEVEQRHSLERNQDAQLLGVKKQLEAQTALHQKTKELLRTAEQQVTSMRQQLNS
ENLGTAPKQPVRTLPKVSAPGVPQQEVDELQARLQQAEEQNSDLKERLKNTTTNVEQYRS
MVLSLEESVNKEKQLAEQARTSIDGQLKTARELNQQLEARLLEAEKEKLELQEEKMKAVD
SVEERVKELKRNVTDMQTELQDALQRAVAAVAQEQRATQDSKLQAKLAAEAQNKYERELM
LHAADVEALQAAKKQGQLSVQNLKQLEEKAQKAASELHQGRTGWEQQEKRLKDELSKEQK
RAVELQKQNTMLHEQMENLSSKITACTQQQSAKESSLNISLNEEGKSHEQILDILRFVRR
EKEITETRLEVAEVETLRYKQRMEYLEGELKELQDSLNAEREKLQVTTKTLTQQEDMMKR
MDSMSALTETNKMLKNEKNRLEHELQQTKAKMRKLEADIKPLLDSNAELSEKSGMLQAEK
KLLEDDVKRLKARTQQLLSQQKDSDQEESKKLNSEREANLKRIQQLTEETGKLKNEVARS
QASITTAQSQVQNLQDSLGKVTTERDNLKKELEAKTLDIQEKLKTITQVKKIGRRYKTQY
EELKDQHDKMVAEAASKPAQEQEDRQASVQEIQNLKSSLSQAQNRSSELETQLDSIQKTV
QEREAELKSLQEQLAQVQPELNRIKAELQEKGNLEEQLRQQIADKEEKTKKAFMGAKQKI
NQLNCAKEQLAKENEELKQQREELDVRMSALKSQYEGRLSRQERELRELREQQERHGEQR
DEAQEPGQSKVQEAQRSSDARQVTLKPTPAADRGSASTSEPPTANIKPTPVAATPSKPSP
IAGSKSTPRASIRPMVTPAPVTTPTATVMPTTQVETQEALPSIEGPLEHVTVYGSTSGSV
RSTSPNIQTTQPILSLQQSQATAFVQPTQQQASQEPATTIMEAVHSSQMERPSTSTAVFG
TVSATAGSSVPKRMREEEQESSTEVSDSTQDDPTHPPITKKLRIIRRLGLEDASGTEESN
DAMGEASGEVQQPSDASEEAYPVLGEGDEESLSQSVPMDQVSESQPSETQISGHDSSEEY
KHDVIIIETDSGTEEEEEEEQEEPGQYEDDDDDDAEDEDDEDGDGGMAEAAEESNEGSGS
ADANEAYEGNEAEGDGGDDPGIDNEESQEASESIQKQADSQSSGEASVSTLESFPAEPVR
EHQPVPSTTTSSLGLRLPQSPRRPHHTPPPRLNIHPIPELGPPIMQRQPGQSRRPSMSRA
PQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMM
PQASSSHSDLSHLATHGGLGMYESPLFLPTHDEESGGRSVPTTPLQVAAPVTVFTESHPS
DVSETASQSVPMVSTSTASLTAPGEAVPGDDGDDVFVAEAESEGASSEACLEGQSEMEST
QPLDDASMPSTSQEPTSSSADTSTSSSTGQAKPASRLLLQHQLPRRNQLIRRGIDFPRGG
RGRGLNRGTPF
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaaacgctggagagaagtgagataaacaaactgccgaaagcc
attcagaacaagctcgagaaggttctatcagagcagcagacggaaatagacttactgaaa
tctcagtacgagcggtataaagcagactgcgagcaacaatactttaatcttgagaagaag
ctagctgagagtcatgagcagttcctgtcccaaagtaaagagtatcatagtattaaagag
gagaacatccgtctcaccgaggaacttaagaagttgaaagatgtagaggaagagcaggga
acaacgcaagagagtacgccaccaagagccaagtatgaaattgaggcagaaaaccgagag
ctctcacggttgcttgagaagagatctcaagaagtggaaaacctcagtgaggatctcaaa
cgtctcaatgacaaactcgcagagaccagcacaatcaagatggagctccagcttaaacta
gatgaacttcagtcatctgaagtttccatccagcatcgtgagaagcgaatggagcaagaa
aaggagcttctccagaaccagaacacatggctgaattcagagctgaagagtaagacagac
gagctgtacacagtattcagagacaagggcaaagaggtcctggagctcaggtgctctttt
gagaccaagaaggaagaggtgaccagacttcaggaccaagtgaacacgctcaagaaaaac
aacgacaacatgcagaagagtactgagaatctgatgaacaaactcaaagaggctaaagag
caacgggcctcgatggaggaaaagtaccgcaatgagctgaatgctaaccttaaactctgt
aatttgtacaagaatgcagcagcagactctgaagccaagaatgctgaattgaacagagcc
gttgaagagctcaacaaactgttgaaggagacgatggaagccaataaaggtacagagaag
aagctgtcagagctgcagggtgtgagggagaaagcagagtctgatctacatgagaaggtc
aggaatctggagaaagagctggagaactccaacacacgccttgcagactttaagagaaga
ggtgttccagctctcacagaagaagagctgacaaacctctcgccaactgcagctgcagtg
gccaagattgttaagccaggcatgaagctaatggagctgtataatgcctttgtggaggca
caagaccagctgcacctggagaaactggagagcaagcgtgtgaacaaggttctagatgag
atagttctggaggtggagaacaaagctcctatcctgaaacgccagagagaggaatatgag
aacatgcagaagtccatgtctagcctctgtgccaaactggagcaagctatgaaggaggtc
catcgactgcagaaggtgaccgatgaagcgaataaaagagctttagggctagagagagat
aatcagagatcaaagagacagttagcagacatgtctgaacaggtaagtgtgctgctggta
gaggtggaggaggcacgtggtaatcaggtggtgcgtgaggacttaagctcagctgtgagc
agcagctctgaggtccagggctcacggcaggtggccttccgaagcgtccaagagcttcag
cagcagaaccagaaccttctggcccagatcagagacctggaggagcagagagagagggac
cagaaccaggctaagactgccagacaaacagagatggatcagagtctggagaaggttcag
aaggaactggagcaaatcaaagatcagcaaaaccaccagaagcagctggctgactctgcc
atccgacaaagagacatgtatcgtatcctgttgcagacagccggagtcgagctcccccca
cagggtttagaggctggatctcagtccaccactcccagcaggtcaggacccatgtccacc
agatctacacccctgagatctgcagcttcagaatctgtccaggcaactcaggctaaagca
gcacttaaacagcttaatgatgccttcacaacatataaaaaagagaaggcagaaaacgac
aagcttctgaatgaacagattgagaggcttcgtggtcaagtgtctgacctgctctcacaa
aaggctaaactttcctctcagctggagttcgcctttaaacgatacgagatgcttcaggag
aatgtgaatggttttcaacgagagattgaagccctacgggagaagaatcaaaagatgaat
gccactcatcagagacatgagcaaatcattcacacaatgactcaagatctgagggaggcc
aatgagaaactaaccatggctgagttgcgtgttgagaatatccgtaaggaacgagacatt
ctgaggcaggtggagaacagactttcccaggagaaagagtccgtcctgactgagcagcgg
ggccagaatctcctgctcaccaacctcaaatccattcagctttttatggagcgctctgag
actgagaccaagcagcgctacaacaaccagacccagcacctggagaaagagattatccag
ttaaagaagaaactggaacaggaggtggaacagagacactcactggaacgcaaccaagat
gctcagctgctcggggttaagaagcagttggaggcacagacagcactacatcagaaaact
aaagagctgctaagaactgctgaacagcaggtcacctccatgagacagcaactgaacagc
gagaaccttggcacagcacctaaacagcctgtcaggacattacccaaagtttcagctcct
ggcgttcctcagcaggaggtagatgagctccaagcacgtctacagcaggctgaagaacag
aactctgacctgaaggagcgtttgaagaacaccaccaccaacgtagagcagtacagatcc
atggtgctcagcttggaggagtctgtaaacaaagagaagcagttggctgagcaggcacga
acttccattgacggccagctgaagactgcacgggagttgaaccagcagctggaagcccgg
ttgctagaagcagagaaggaaaagctggagctccaggaggagaagatgaaagctgtagat
agcgttgaagaacgggtgaaggaactgaagaggaacgtgacagacatgcagacggagctg
caggatgccctacagagagctgtggcagcggtggcccaggagcagagagccacacaggac
agcaaacttcaggctaagctggctgcagaggctcagaataaatacgagcgagagctcatg
ctgcatgctgcggatgtggaagccctacaggctgccaagaaacaggggcagttgtcagtg
cagaacctgaagcagctagaggagaaggctcagaaagctgcatctgaactgcatcagggt
cggacgggctgggaacagcaagagaagagactgaaggacgaactttctaaagagcagaag
agagctgtggagctgcagaagcaaaacaccatgctccacgagcagatggagaacctgagc
agcaagataaccgcctgcacccagcagcagagcgctaaagagagcagtctgaacatctct
ttgaatgaggagggcaagtctcatgagcagatcctggacattctcaggtttgtacggcgg
gagaaggagattactgagacccggttggaagtggcagaggtggagaccctgcgctataaa
cagcgcatggagtaccttgagggagagctgaaagaactacaggacagcctcaatgcagag
agagaaaagctacaggtgacaacaaagaccttgacacagcaggaagacatgatgaagcgg
atggatagtatgagtgctctaaccgagaccaacaagatgctgaaaaatgaaaagaacaga
ctggagcatgaactacagcagactaaggccaagatgcgtaagttggaagcagacatcaag
cccctgctggactccaatgctgagctgagtgagaagagtggcatgttacaggctgagaag
aaactcctggaggatgatgtcaagcgattgaaggcccgcacacagcaactgctgagtcag
cagaaggacagcgatcaggaggaaagtaagaagctgaattctgagagagaggccaatctc
aaacgcatccagcagctcacagaggagacggggaaactcaagaatgaggtggccaggagc
caagcttcaatcactacagctcagagccaggtgcagaacctgcaggatagccttgggaag
gtcaccactgaaagggataatctgaagaaggagctggaggcaaagacactggacatccag
gagaaactcaaaaccatcacacaagtcaagaagataggtcgtcgctacaaaactcagtac
gaagagctcaaagatcagcatgataagatggtggcagaggctgcttctaaaccagcacag
gagcaggaagaccgtcaggcctcggtgcaggagattcagaacctgaagagctcattgagt
caggcacagaacagatcctcagagctggaaactcaactggacagcatacagaagacggtg
caggagcgtgaagcggagctgaagagcctgcaggagcagctggcacaggtgcagccagag
ctcaaccgtataaaagcagagctacaggagaagggtaacctggaggagcagctccgacag
cagatcgctgataaagaggagaagaccaaaaaagctttcatgggagccaaacagaagatc
aatcagcttaactgtgcaaaggagcagctggcgaaagagaacgaggagctgaagcagcag
agagaggagctggatgtgaggatgagtgcactcaagtcacagtatgaaggccggttgagc
cgacaggagagagagctgagggaactccgtgagcaacaggagagacacggagaacagaga
gatgaagctcaggagcctggccagagcaaggttcaggaggcacagaggtcatcagatgct
cgacaggtcactctcaaacccacacctgcggctgacagaggaagtgccagtacatccgag
ccgcccaccgctaacatcaagcccacaccagtcgctgccacccccagcaagccttcaccg
attgcagggagcaagtccacccctagggcaagcatccgcccaatggtaacacccgctcct
gtaaccacgcccacagccacagtcatgcccaccacacaggtcgaaacgcaggaagctctg
ccatccatagagggtccactagagcatgtgactgtctatggcagcaccagcggctcagtg
cgctccactagccctaacatacagacaacacagccaatcctcagcctgcagcagagtcaa
gccactgcttttgtccagcccactcagcagcaggccagtcaggaaccagcaacgaccatt
atggaggcagtacatagctcacagatggagaggccgtccacttccactgctgtctttggg
acagtgtcagcgacagcaggctcatctgtgcccaaacgaatgcgagaggaagagcaggag
agctccaccgaggtgagcgactccacacaggacgaccccacccacccacccatcactaag
aagctccgcatcataagaagactgggcctggaggatgcttcaggtactgaggagagtaat
gatgctatgggtgaagcttcaggagaagtccagcagccttctgatgccagtgaggaagca
tatcccgtgttaggagagggagatgaagaatctttgtctcagtctgtcccaatggatcaa
gtgagtgagtcccaaccatccgagactcagatcagcggacacgactcatccgaggagtat
aagcatgacgtcatcatcatagagacagatagtggcactgaggaggaagaggaggaggag
caggaggagcctggacagtatgaagatgatgatgatgatgatgctgaagatgaagatgat
gaagatggtgatggagggatggcagaagcagctgaggagagtaatgaaggcagtgggagt
gcagatgccaatgaggcctatgaggggaatgaggcagagggtgatgggggagatgatcca
ggcattgacaatgaagagagtcaagaagcatctgagtcgatccagaagcaagcagactct
cagagcagtggtgaagctagtgtcagcaccttggagtccttccctgctgagcctgtgaga
gagcaccagccagtccccagcaccaccacctcctccctgggcctacgcttgccccaatcc
ccccggagaccgcatcacaccccacccccacgtctcaacatccaccccattcctgagctt
ggaccccccatcatgcagaggcagccaggacagagcaggcggccctcgatgagtcgtgca
ccccagctcacgcctggaatcggaagcatgcaacacttctttgatgacgatgacagaatg
gttcccagcactcccacccttgtggtgccacaccgcacagacggctttgcagaggccatt
cattctcctcaggtggctggcgttcctcgcttccgtttcggccctcctgaggacatgatg
cctcaggccagctcctctcattctgacttgagccatctggccacacatggagggttgggc
atgtatgaaagtcctctcttcctgcccactcacgatgaagaatctggaggcaggagtgtc
cccaccacccctctacaagtggctgctccagtgactgtattcacagagagtcacccctct
gatgtgtcagagacagcctctcagtcggttcccatggtgagcacgtccaccgccagtctg
accgccccaggcgaagctgtcccgggagatgatggagatgatgtttttgtggctgaggct
gagagtgaaggggcgagtagtgaggcgtgtctagagggccagtcggagatggagtccact
cagccgctcgacgatgccagcatgccctccactagtcaagagcccacatccagctccgca
gataccagcactagcagcagtactggtcaggccaagcctgcaagccgactcctccttcag
caccagctgccccggaggaaccagctcatcaggagaggtattgattttcctcgtggaggc
cggggtcgaggactcaacagaggcactcccttctaa
DBGET
integrated database retrieval system
