Rhinichthys klamathensis goyatoka (western speckled dace): 130079539
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Entry
130079539 CDS
T09701
Symbol
smc1al
Name
(RefSeq) structural maintenance of chromosomes 1A, like
KO
K06636
structural maintenance of chromosome 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
rkg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130079539 (smc1al)
04114 Oocyte meiosis
130079539 (smc1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130079539 (smc1al)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130079539 (smc1al)
Meiosis-specific proteins
Cohesin complex and associated proteins
130079539 (smc1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SlyX
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
130079539
NCBI-ProteinID:
XP_056100811
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQQDSGQDLTFSRIIIGSSSEYRINSKVVPLAEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRLKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLFHRESEIEKLNR
ELAHRNKEIDKDRKRMDRVEDELKDKKKELGRMMRDQQTIEKEIKEKDADLNQKRPLYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKGDMDELDREQGSVEMARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEILESIKRLYPGSVYGRLIDLCQPTQKKFQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFSPRINDIKRIVQSRERDMKDLKDRMNLVEDEVFLDF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVIMWEQ
TVKKDESEIERLKKEEQRNMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQEEGSSQAE
ESLSSSQKASSTVLAKEALIEIDFSSLSEDLKDSLSEDELKAEMNTLQQRLNEQQSILQR
ISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVAT
NIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA
LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADS
LIGVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggctacctaaagttaatagagatcgaaaactttaagtcttacaaaggcagacagata
atcgggcctttccacaagtttacagcgattattgggccgaatggatcaggcaaatccaat
ctcatggatgccatcagctttgtcctggcagagaagaccagtaacttgcgtgtgaaaaca
ctgaaggatttgattcatggcgctccagtgggcaaacctgcggcgaaccgagcgtttgtg
agcatggtgtaccagcaggacagcggccaggacctgaccttctccaggatcatcatcggc
tcctcgtcggagtaccgcatcaacagtaaagtggtgccgctggcggagtacagcgaggaa
ctggagaaactggggatcctcatcaaggccagaaacttcctggtctttcagggtgcggtg
gagtcgatcgccatgaagaaccctaaagagagaaccgctctgtttgaggagatctctcgc
tctggagagctcgctcaggagtacgacaggctcaagaaggaaatggtgaaggccgaggag
gacacgcagttcaactaccaccggaagaaaaacatcgcagcggagcgaaaagaggccaag
caggagaaagaagaggcggagcggtaccagcggctgaaggacgaggtggtgcgcgcgcat
gtgcagttacagctcttcaaactgttccacagagagtccgagatagagaagctgaaccga
gagctcgcccaccgcaacaaagagattgacaaggacaggaagcgcatggaccgtgtggag
gacgagctgaaagacaagaagaaggagctgggccgcatgatgagagaccagcagaccatt
gagaaggagatcaaggagaaggatgcagatctcaatcagaagaggcctctgtacattaaa
gccaaggagaacacggctcacaagataaagaaactggaggcggcccgtaagtctctgcag
aacgcccagaaatgctacaagaagcgcaagggagacatggacgagctggaccgggagcag
gggtcagtggagatggcccgacaggagtttgaggagcgcatggaggaggaggcccagagc
caggggcaagatctgcagctggaagagaaccaggtgaaggcataccaccgcctgaaggag
gaggcgagtaagcgagctgctacactggctcaagagctcgagaagttcaacagagaccag
aaagctgaccaggaccgcctggacctggaggagaggaagaaaatagagacggaggccaag
atcaagcagaagatccgagagatcgaggagaaccagaagcgcattgagaagctggaggac
tacatcaccaccagcagacagtctctggacgagcagaagaggatggaggaggagctgacc
gaagaggtggagcaggccaaacggaggatagatgagatcaacatggagctcaaccaggtg
atggagcagctgggtgacgctcgaatcgacagacaggagaacagcaggcagcagcgcaag
gctgagatcctggagagcatcaagaggctgtatcctggatcagtgtacgggagactgatt
gacctgtgccagcccacacagaagaagttccagatcgctgtcaccaaagtgctgggcaaa
aacatggatgctatcatcgtggactctgagaagacgggtcgtgattgtatccagtacata
aaagagcagcgtggcgaacccgagaccttcctgcccctggactacctggaggtcaagccc
acagatgagaagctgcgtgagctgcgtggtgccaaactggtgattgatgtaatccgatat
gagccgccacacattaagaaagccctgcagtacgcctgtggaaacgccctggtctgtgag
aacgtggaggacgctcgcaggatcgcgttcgggggaccatacagacacaagactgtggct
ctagacgggacgttattccagaagtctggagtgatctccgggggtgccagtgacctgaag
gccaaggctcggcgctgggatgagaaggccgttgataaactgaaagacagaaaggaaaaa
ctcacagatgagcttaaagagcaaatgaaggccaagaggaaggaggcagagctgcgtcag
gttcagtctcaagctcacggtttgcagatgagactcaaatactctcagagtgatctggag
caaaccaagaccagacacctgtccctcaacatgcaggaaaaatctaagctggagagtgaa
cttgctaattttagtccacgcattaatgacatcaagagaatcgtccagtcacgagagaga
gatatgaaggacttgaaggaccgcatgaacctggtggaggacgaggtgtttctggacttc
tgtaaagagatcggagttcgtaacattcgtgaatttgaagaagagaaagtcaagagacaa
aatgagattgcaaaaaaacgcctggagtttgagactcaaaagactcgcctggcgatccag
ctggactacgagaagaaccagctgaaggaggaccaggagaaggtgatcatgtgggaacag
acggtcaagaaagatgagagcgagatcgagagactcaagaaggaagagcagaggaatatg
aagatcattgatgaaaccatggcacaactgcaggatctgaaaaaccagcacttggccaag
aaatctgaggtcaatgataaaaaccatgagatggaggagatccgcaagaaattggggggt
gcaaacaaggagttgacgcagctgcagaaggaggtgacggccatcgagaccaagctggag
cagaagcgcagcgacagacacaacctgctgcaggcctgcaagatgcaggacatccggctc
ccgctgcgctccggcaccatggacgacatcagccaggaggagggcagttctcaggccgag
gagagcctcagcagcagtcagaaggcatctagcactgtcctagccaaggaagctctcatt
gagatcgacttcagcagcttgtcagaagacctaaaggactctctgtccgaggacgagctc
aaggcggagatgaacacattacagcagagactcaacgagcagcagagcatcctgcagagg
atcagcgcccccaacatgaaggccatggagaagctggagagcgtccgagacaagttccag
gagaccagcgacgagtttgaagctgccaggaagagggcgaagaaggccaagcaggcgttt
gaacagataaagaaggagaggtttgaccgcttcaatgcctgctttgagtctgtggccacc
aacatcgatgagatctataaagctctgtcccgcaacagcagtgcccaggcttttctgggg
cctgagaaccccgaggagccatacctggatggtatcaactataactgtgtggccccaggc
aagcgtttccggcccatggacaacctgtctggcggagagaagactgtggctgctctagcg
ctgctgttcgccattcacagctataagcctgctcccttcttcgtgctggacgagatcgat
gccgcactggacaacacaaacattggcaaggttgcaaactacatcaaggatcagtcggtg
cagaacttccaggctatcgtgatctccctgaaagaggagttttacaccaaggcagactcc
ctgatcggagtctatccagagcaaggagactgcgtcatcagtaaagtcctgacctttgac
ctctcccagtatcctgacgccaatcccaatcccaatgagtga
DBGET
integrated database retrieval system
