Rhinichthys klamathensis goyatoka (western speckled dace): 130079604
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Entry
130079604 CDS
T09701
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130079604 (cdh12a)
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Major cadherins
130079604 (cdh12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
Cadherin_CELSR2_9th
Stevor
7TM_GPCR_Srw
Spore_permease
Motif
Other DBs
NCBI-GeneID:
130079604
NCBI-ProteinID:
XP_056100897
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MLMGNCLLLFLWCLLDKSFVSPLHSSSQSRMGKEQHRNMMAHRKHGMMGVHRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHSDLDKGDSMVKYTLSGEGVGSIFTIEPSTGDIHALRSLDR
EEKPYYTLRAQAVDVFTGRPLEPESEFIIKVQDINDNEPKFLEGPYSASIPEMSPIGTCV
TQITATDADDPTYGNSARIVYSILHGQPYFSVDPKTGVIRVALPNMDREVKEMYQVAIQA
KDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVLESSPVGSSVGRVKAHDLDSG
KNAEVEYSIVAGDGSSMFDIYSNKNTQEGTVILKKRLDYETRKAYTFKVEASNAVLDHRF
LHLGPFKDTATVKVNVLDVEEPPVFSRLSYRMETYEDTPVGIIVGAITAEDLDVGNSPVR
YSIEWRKDSENHFDIDPVEGTLSVSEALDRERIAEHNVTVVATKVNNPLLSSKVTVTVKV
LDVNEFPPELPFIYETFVCENAKVGQVIQIISATDKDMPAVEHRFYFKSPSQTRNRNFTI
RDYGNNTAGVATRRGGFRRLEQSMYLVPVVVEDSGYPIQSSTGTVSVRVCTCDTDGSLLS
CNAEAVFFPMGLSTGALMAILLCIVILLVMVVLYMGLRKHKKEDTLMSSKEDVRDNVIHY
DDEGGGEEDTQAFDIGTLRNPKGIKETAQLQKIRSEDEPDLASACVSKEDSEDIRTYIHH
CLLENSTPPYDSLVTYAYEGEGSVAESLSSIESWVLEPKEDYRNLCDWGPRFKTLAGIFK
ENECKAMEKVENEAHAEALKDRLD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggggaattgcctgctgctgttcctctggtgcctcttagacaaaagctttgtt
tctcccctccactcttcatcccagagcaggatggggaaggagcagcacaggaacatgatg
gcacataggaaacatggaatgatgggagttcacagagtcaagagaggatgggtgtggaac
cagttctttgttctagaggaatacatgggatctgatccgcagtatgtcggaaagcttcac
tctgacctggataagggagatagtatggtgaagtacactctctcaggtgaaggagttggc
tctattttcaccatcgagccgagcactggagacatccatgccttaaggagcctggacaga
gaagagaagccttattacacactgagagcgcaggctgtggacgtgttcacgggcagaccc
ttagagccagagtcagagtttattatcaaagtccaggacatcaatgacaatgagccaaag
ttcctggagggcccatactcagccagcatcccagagatgtcacccatcggcacatgtgtg
acgcaaataaccgccactgacgctgatgaccccacttatggaaacagcgcgcggattgtg
tacagcatccttcatgggcagccctacttttctgttgaccccaagacaggggtcataaga
gttgccttacctaatatggatagggaggttaaagaaatgtaccaggtggccatacaggct
aaggacatgggcggtcagcttgggggcttagctggaaccactaccatcaatatcactctc
cgtgatgtcaatgacaacccaccgcggttttctaaaagtatctttcacttgcgtgttctt
gaatcttcacctgtgggctcatcggtgggaagggttaaagctcatgatcttgactctggg
aagaatgctgaagtggaatatagcattgttgctggtgatgggagctccatgtttgacatt
tacagcaataagaacacacaagaaggaacagtcattctgaaaaagcgtttggactatgaa
accagaaaggcctacacctttaaagtagaggcttcaaacgcagttcttgatcatcggttc
ctacatttgggaccttttaaggacactgccacagttaaagtgaatgttctagatgtggag
gaacctcctgtcttcagccggctgtcttatagaatggagacatacgaagacacaccagtg
ggcatcatcgtcggagccatcacagctgaggacctagatgtaggcaacagtcctgtaaga
tattctattgagtggagaaaggactctgaaaaccactttgacattgaccctgttgaagga
actctgtctgtcagtgaagccctggacagagagagaatcgctgaacacaacgtcactgtt
gtagcaacaaaagttaacaaccccctgctgtccagcaaagttactgtcacagtcaaggtg
ctggatgtcaatgagtttcccccagaacttccatttatatatgagacgtttgtttgtgaa
aatgcaaaagtagggcaggtgattcagatcatcagtgccacagacaaagacatgccagct
gtagagcaccgattctacttcaaatccccatcacagaccaggaacagaaacttcacaatc
agggactatggaaacaacacagctggagtggcgaccaggcgaggggggtttcggaggcta
gagcagagcatgtacctggtaccggtcgtcgtggaggatagcgggtacccgatacaaagc
agcactgggacggtgtctgtgcgggtgtgtacctgcgacacagacggctccctcctttcc
tgcaatgcggaagccgtgttctttcccatgggactcagcactggagctctgatggccata
ctgctgtgcattgtcattctgctggtgatggtggtgctctatatgggcctgagaaaacac
aagaaggaggacactctgatgtcgtccaaagaggacgttcgggacaatgtgatccactac
gacgatgaggggggcggggaagaggacacccaggccttcgacataggtacgttacgcaat
cccaaaggcatcaaagagacggctcagctgcaaaaaataagatcagaggacgagcctgat
ctggctagtgcgtgcgtgtccaaagaggacagcgaggacatcagaacctacatccatcat
tgtcttctagagaactccacacctccgtatgactctctggttacatatgcatatgaggga
gagggttcggtggcagagtccctcagttccattgagtcttgggttctcgaacccaaggag
gattacagaaatctctgtgactggggtcctcgtttcaaaacgctggctgggatatttaaa
gagaatgagtgtaaggccatggagaaggtggaaaatgaagcacatgctgaggcactaaag
gacagactggactga
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