Rhinichthys klamathensis goyatoka (western speckled dace): 130079651
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Entry
130079651 CDS
T09701
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00450
Selenocompound metabolism
rkg00970
Aminoacyl-tRNA biosynthesis
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130079651
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130079651
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rkg01007
]
130079651
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130079651
Enzymes [BR:
rkg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
130079651
Amino acid related enzymes [BR:
rkg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130079651
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130079651
Prokaryotic type
Other AARSs
130079651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
130079651
NCBI-ProteinID:
XP_056100969
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MSVEEIEGAAQVWAEGLTARSAAIERKHPILPQEGKRNVLLTSALPYVNNVPHLGNIIGC
VLSADVFARYGRLRGWNLLFVCGTDEYGTATENKAREEGLTPQEICDKYHTIHASIYQWF
QIDFDFFGRTTTERQTEIAQDIFWRLHERGFLLEDTVEQLRCESCQRFLADRFVEGVCPH
CHYPEARGDQCDKCGRLINAVELRNPQCKVCKETPVIRSSKHLFLDLPKLEGELEQWLEK
SIGSGDWTANARHITRSWLRDGLKPRCITRDLRWGTPVPHEDFKEKVFYVWFDAPIGYLS
ITANYTDQWEKWWKNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYL
NYEDTKFSKSRGVGVFGDNAKDTGIPSDVWRFYLLFLRPEAQDSAFSWADMAIKNNSELL
NNLGNFINRAGMFVSKFFDGCVPEMLLNEDDKRLIAQVCWELKQYISLLDKVRIRDALKC
ILNISRHGNQYMQVNEPWKKIKGGDDDRQRAGTVTGVCVNVACLLSAVLEPYMPTVSHTI
RVQLQAPPTCASAQLQGPGSFVCSLPAGHRIGTVSPLFQKLENEQIEALKKRFGGQQPEE
ECVEAKTQSSSSASAETKPGAPQAHTDPERVKHLTTLVAEQ
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggaagagatcgaaggagcggcgcaggtctgggctgaaggactcacagctcgc
tctgccgccatcgagaggaaacacccgattctccctcaggaaggaaagagaaacgtgctg
ctcacgagcgctctgccctacgtcaacaacgtgcctcacctggggaacatcatcgggtgt
gtgctcagcgccgacgtgttcgccagatatgggcgtctgcgcggctggaatctcctgttc
gtctgcggtacggacgagtacgggacggccacggagaacaaggctcgcgaggagggactg
acgccgcaggagatctgcgacaaataccacaccatccatgcctccatctaccagtggttc
cagatcgacttcgacttcttcggccgcaccaccactgagcgccagactgaaatcgctcag
gatattttctggcgtctccatgagaggggtttcctgctggaggacacggtcgagcagctt
cgctgtgaaagctgtcagcgattcctggccgatcgcttcgtggagggcgtgtgtcctcac
tgccattacccagaagcccgcggggaccagtgtgacaaatgtggccgtctcatcaacgct
gtggagctcaggaatccgcagtgtaaagtgtgcaaggaaacgccggtgatccgctcctct
aaacacctgttcctggacctgccgaagctggagggcgagctggagcagtggctggagaag
tcgatcggctcgggcgattggacggcgaacgctcggcacatcacgcgctcgtggctccgg
gacggcctgaagccccggtgcatcacacgagacctgcgctgggggacgcccgtgcctcac
gaggacttcaaggagaaagtgttctacgtttggttcgacgctcctattggctacctgtcc
atcacggcaaactacaccgaccaatgggagaaatggtggaagaaccctcagcaggtggag
ctgtacaacttcatggcgaaggacaacgttcccttccacagtgtcgtcttcccttgttca
cttctcggagctcaagacaactacacactggtcaataacctcattgccaccgaatacttg
aattacgaggacaccaagttctccaagagccgtggtgtgggtgtgttcggtgacaatgcg
aaggacacgggcatcccgtctgacgtgtggcgcttctacctgctgttcctgcggcccgag
gctcaggactccgccttctcatgggccgacatggccatcaagaacaactctgagctgctc
aacaacctgggcaacttcattaacagggcagggatgtttgtgagtaagttcttcgacggc
tgtgttcctgagatgctcctgaatgaagacgataagcgtctcatcgctcaggtgtgctgg
gagctcaagcagtacatctcgctgctggataaagtcaggatccgtgacgctctgaagtgc
atcctgaacatctctcgtcacgggaaccagtacatgcaggttaacgagccctggaagaag
attaaaggaggagacgacgacaggcagcgcgccgggaccgtgacgggggtgtgtgtgaac
gtggcgtgtctcctgtctgccgtgctggagccgtatatgccgacggtcagccacaccatc
cgtgtccagctccaggctccgcccacctgtgccagtgcccagctccagggcccggggagc
ttcgtctgctcactgccggccgggcaccgcatcggcacggtcagtcctttgttccagaag
ttggagaacgaacagattgaggctctgaagaaaagattcggaggtcaacagccggaagag
gagtgtgttgaagcgaagacgcagagttccagcagcgcttcagccgagaccaaacctgga
gctccacaggctcacaccgaccccgagagagtcaaacacctgacgactctagtggctgaa
caa
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