Rhinichthys klamathensis goyatoka (western speckled dace): 130079678
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Entry
130079678 CDS
T09701
Symbol
top1mt
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130079678 (top1mt)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130079678 (top1mt)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Topoisomerases
130079678 (top1mt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
DUF641
LCIB_C_CA
Ntox15
Motif
Other DBs
NCBI-GeneID:
130079678
NCBI-ProteinID:
XP_056101010
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLDHEYTSKEAFQNNFFTDWREEMTSDERKRIKTLSKCDFSHMHKYFVEKAEERKNMTKE
EKQVLKEESSRLVEEYGFCVLDGHREKIGNFKLEPPGLFRGRGEHPKMGKLKKRIQPEHV
AINCSQDSKIPEAPAGHRWKRVQHDNTVTWLASWLENIHGRPKYIMLNPSSKLKGEKDWQ
KYETARQLKVCVNTIRKQYKRDWTSREMKSRQRGVAIYFIDKLALRAGNEKDDESADTVG
CCSLRVEHISLHRRLDGLEHVVEFDFLGKDSIRYYNKVPVEKQVFKNLKLFIKHKDPEDD
LFDRITTVNLNKALNECMPGLTAKVFRTFNASTTLQDQLNKLTTEDMTVEEKILSYNRAN
RAVAILCNHQRAAPKTFEKSMQLLQEKIQKKKEQIEEARKELKEAKRAHKDAPSDKSKKL
VEKEKLVQRLCEQLKKLQLQETDREENKVIALGTSKLNYLDPRITVAWCKKHNVPVEKIY
NKTQRDKFTWAIHMTDETFQF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccacgagtacaccagcaaagaggcgtttcagaacaacttcttcactgactgg
cgggaggaaatgactagcgacgagaggaagcggatcaagacgctctccaagtgtgacttc
agccacatgcacaagtacttcgtggagaaggcagaggagcgcaagaacatgacgaaggag
gagaagcaggtcctgaaggaggagtccagccgtctggtggaggagtacggcttctgtgtg
ctggacggacaccgggagaagatcgggaacttcaagctggagccgccgggtctgttccgc
gggcgcggagaacacccgaagatgggcaaactgaagaagcgcatccagccggagcacgtg
gccatcaactgcagccaagactctaagatcccagaagcccctgcaggacaccggtggaag
cgcgtccagcacgacaacacggtcacatggttggcgtcgtggctcgagaacatccacggg
cgacctaaatacatcatgctgaaccccagctccaaactcaagggcgagaaggactggcag
aagtacgagacggcgcgtcagctgaaggtgtgtgtgaacaccatcagaaagcagtacaag
cgcgactggacgtcccgagagatgaagagcagacagagaggtgtcgccatctacttcatc
gataagctggccctgcgcgcggggaacgagaaggacgatgagtcagctgatacggtgggc
tgctgttctctgcgtgtggagcacatctcgcttcaccggcgcctcgacggactcgaacac
gtcgtggagttcgacttcctggggaaagactccatccgctactacaacaaagtgccggtg
gagaaacaggttttcaagaacctgaagctgttcataaagcacaaggatccagaagatgat
ttattcgaccgaattacaacggtcaacctcaacaaagccctgaacgagtgcatgccggga
ctgacggccaaagtgtttcgaaccttcaacgcctcgaccacactgcaggatcagctcaac
aagctcaccacagaggacatgacggtggaggagaagatcctgtcgtataaccgagcgaac
cgagccgtggcgatcctctgtaaccaccagagggcggcgcccaagaccttcgagaagtcc
atgcagcttctgcaggagaagatccaaaagaaaaaggaacaaattgaagaggccagaaag
gagctgaaggaagcgaagcgagcgcataaagacgctccgtctgacaaatccaagaagctg
gtggagaaggagaagctcgtccagagactgtgtgaacagctgaagaagctccagcttcag
gaaacggatcgagaggaaaacaaggtcatagctctgggaacgtctaaactaaactacctg
gacccgcgcatcactgtggcctggtgtaagaaacacaacgtccccgttgaaaagatctac
aataagacgcagcgggacaagttcacctgggccatccacatgacggacgagaccttccag
ttctga
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