Rhinichthys klamathensis goyatoka (western speckled dace): 130079976
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Entry
130079976 CDS
T09701
Symbol
optn
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137
Mitophagy - animal
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130079976 (optn)
04137 Mitophagy - animal
130079976 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130079976 (optn)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130079976 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130079976 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
130079976 (optn)
Xenophagy
Cargo receptors
130079976 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
PUMA_CC
FlaC_arch
DUF4248
EDR4-like_1st
ATG16
Motif
Other DBs
NCBI-GeneID:
130079976
NCBI-ProteinID:
XP_056101209
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MTVDRHLPVTRLLYRPVLLDHRSARSSLFTDVCNRKRAFSKQVGAHKKGTLSHCSLTDTE
NMASGSSMMNGDISHPRGSGPGNVGSLEETLQQMNTLIKENRELKEALKQTNMSMKERFE
GLSAWKEMQKEERDFLEKRLEEAKTKLNTMDAENEMLKKRVEELEKSGAECLHTELEALR
GQIGRLQAEKNDLVALNSELQLKTGQGSPSDSFIEIRIAEDDDLKVTRDLPSTQKDLSAF
CMQKGESEEQTVRQLLHSLRAETDEKERLQITLQEARGRIAEFENRLEHADSSAQTSLPC
TTEINSSAEVKNLEEQLLKLCNELKQAQIKLDDAENMKRNLQDRCKDLEQDLGTVRAQLG
EKQKTQAENDCLKVQMESLQAAIKLEQKKTQDEKNNLNQLKDAYTKLFEDYNELQEEKKK
KEGSVSREEYDDLQTRFDTAEKALADKQLKIDEMKMEIFTKEKELDTISVFQAQAEIYSS
DFYAERAAREKIHEEKERLATQLEYVKKQNSQLQEEMESLGRHSMSEMQRRHVPRGANPQ
GPTSPHNLQGGDWQQQNIPDHACPKCGDVLPDLDSLQIHIMDCII
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggatagacacttacctgtaacacgcttactgtatagaccagtcctgctggat
cacagatccgcgcgctcatcgctcttcactgacgtgtgcaacaggaaacgagcattctca
aaacaagtcggtgcacacaagaagggaacgctttcacactgtagcttaacagacaccgaa
aacatggcatctggttcatctatgatgaacggagacatcagtcaccctcgcgggtccggc
ccggggaatgtgggcagtttagaggagaccctccagcaaatgaacaccctgatcaaagag
aacagagaactgaaggaagccctgaaacagaccaacatgtccatgaaggagagatttgag
ggtctatcggcatggaaggagatgcaaaaggaggagagagacttcctggagaaacgatta
gaagaggccaaaaccaaactgaacactatggatgcagagaacgagatgttgaagaaacga
gtggaagagctggaaaaaagtggagccgagtgtttacacactgaactggaggcactgagg
ggtcagattggtcgacttcaggctgagaagaatgatctggtagcattgaactccgaactc
cagctcaaaacgggacaaggttcacctagcgactccttcattgagattagaatagctgag
gacgatgatttaaaagtgaccagagatttgcccagtacacaaaaggacctatctgcattc
tgcatgcaaaagggcgagtcggaggaacagacggtcaggcagctccttcactccctcaga
gcagagactgatgaaaaggagagactgcagataacgcttcaggaggcacgtgggagaatt
gcagagttcgagaacagactggaacacgctgacagcagcgcacagacgtctctcccctgt
acaactgaaatcaattcaagcgctgaggtgaagaatctggaggagcagttgttgaagctc
tgtaatgaactgaaacaagctcagatcaaactagacgatgctgagaacatgaaaagaaac
ctgcaggacaggtgtaaagatttggagcaggatctgggcaccgttagggctcagctggga
gagaaacagaagacccaggctgagaacgactgtctgaaggttcagatggaaagtctccag
gctgctattaaactggaacagaagaaaactcaggatgagaagaacaacctaaaccagcta
aaagatgcctacaccaagctgtttgaagactacaatgagctccaagaggaaaagaagaag
aaagagggtagtgtatcacgggaagagtacgatgacctccaaaccaggtttgatacggct
gaaaaggcgctggcagacaaacagctgaagattgatgagatgaagatggaaatcttcacg
aaggaaaaggagctagatactatctctgttttccaggctcaggcagagatatattcgtca
gacttctatgcagaacgagctgctcgggagaagattcacgaggagaaagagcgtttggcc
actcagctggagtatgtgaagaaacagaacagccaacttcaggaggagatggaatcactt
ggcaggcattccatgagcgagatgcaaaggagacatgtgccacgtggggccaatccacaa
ggccccacatctccacacaacctgcaaggaggtgattggcagcagcagaatattccagac
catgcttgtcccaaatgtggggacgtcctacctgacctggactccctgcagatccacatc
atggattgcatcatctga
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integrated database retrieval system
