Rhinichthys klamathensis goyatoka (western speckled dace): 130080134
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Entry
130080134 CDS
T09701
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130080134 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130080134 (abca5)
Transporters [BR:
rkg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
130080134 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130080134
NCBI-ProteinID:
XP_056101400
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MYFIPVSDPCASQLKHAGRMQPITRRDAGVWHQTRSLLYKNLLIKWRTKQQSLQELILPL
LLLGLLVLISTLNPHVSYGSISTKELEYERDLALKGLGYTPINNVTNHIMEEVARELPMN
ERLDMFSTEEDLENASLYEPDGYVGVVFLDSMSYRLRFPYNQLPLPSDFTESITSCYTDY
VNCRAANYWYSGFVRLQSLIDAAIIQLKTKRPVWNELKVRAVMMGHPGSVEVQKFPHALI
SIYLVLAFTPFVSFLIVNVAAEKEQRLKDTMSMMGLYDSAFWLSWGLLYAALVTTMSILM
AVIATCTPLFSNSNFFVIFLLIFLYGISSIFFSFMLTPLFKKPKFASTVGSMLTVVFGCL
SLFTVLMRDFPQSAVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSTLGIGPHALYVPMV
MLFLDCILYLLIAIYLDQVLPGEFGTRRSVLYFLQPSYWSKRRKRYVEVSSVYEGEVNGT
PVNDESVEAVSPEFRGKEVIRICNIRKIYKEKDTKVEALRGLTFDIYEGQITALLGHSGA
GKSTLMNILCGICPPTEGTATIYGSPVAEIAEGAEMKQLVGICPQFNIIFDVLTVEEHLR
IFAAIKGILPSDIDGEVRKVLKDLDLEKIMDAQAKNLSGGQKRKLSVGIAVLGDPKVLLL
DEPTAGMDPVSRHQVWSLLKSRKAGRVTVLSTHYMDEADILADRKAVISQGQLKCVGSSL
YLKTKCGVGYHLRMSVTEGCEVDNITPLVKNHVPKAQLSRQQEAELTFTLPFESMDTFPG
LFAELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQDKVEEEGDSCSLDD
TDQRLLTFSDSRQDAVTGHALWRQQFSTVAWLHMLNLQRERKPIIYNLTLFLVFLCAMLI
LSVATGNIQIHSPERLFSPIYLLRRNEAPHKYTSSLLVQNSTYSDLTGFIHNLESQNIKV
EMMKKPDYMSAAPVSAAINVTGSGKDFTYILAFNSTTVHSLPMAVNVLSNALLRGFNGTG
RIRTWTKPFDYQIPDKTSYALVYIEAVILGMLAAGMPAYFAMDHTRDRELKCRSTLRISG
LVPSAYWCGQAAIDVPFYYLILTCMTSTLFAFHSTNLLTSHNIMSVALCLIGFSPAMVLF
TYCVSFMFVRVQSNRDFFSVLSMMLCVVSASIVQLALVNENSGVARLLHNALCFFSPLYP
LMGCLNCITMATFLQSPHDDDFLWKNLFISVVAPYIQCILLLFTLRCLEIRYGGKTMKND
QLCRISSQAKGKAQRNPEESVSEDEDVQMEKARVKEALTCQCCEEKPVVVVSNLRKQYKG
KREAFSLHKRRKVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTEPNAGQILMGD
YGTDFQPMENPLEHVGYCPQVNPLWPRITLQEHLEIYAAIKGLHQRDIPNIIKRVVSALE
LKDHLYKQAKNLSAGLKRKLCFALSMLGNPQIVLLDEPSTGMDPKSKQRMWRAIRAAFKN
KQRGALLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKFGRGYSLEINLREELTGL
QQVALLHKEILKIFPHAARQDSFATLMVYKIPMEDVKSLAKSFAQLESAKQNFHFEEYNF
SQSTLEQVFMEFAKEQEKEEEEVGSLSTTFQWQRLRQDGPISINHADSIVHQL
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgtgtctgatccatgtgccagtcaactgaagcatgctggaagaatg
cagcccataaccagaagagatgccggagtctggcatcagacgaggagcctgctctacaaa
aacctgctgatcaaatggaggaccaaacaacagagtctccaggagctgatcttgccgttg
ctcctcctgggcctcctggtcctcatcagcaccctcaaccctcatgtctcatacggcagt
atcagcactaaggagctggagtatgaacgggacctggcactcaaaggtcttggctacacc
cccatcaacaatgtcaccaatcacatcatggaagaggttgcacgggaactgcctatgaat
gagcgattagatatgttctccactgaggaagacttggagaatgccagtctctatgaacct
gatggctacgtgggagtggtcttcttggattcaatgtcataccgcctgcgattcccatac
aaccagcttcctctgcctagtgacttcactgaatccataacaagctgttacacagactat
gtcaactgccgtgctgccaactactggtattctggattcgtacggctgcagtctctcatt
gatgctgccattatacagttgaagaccaaacgcccggtgtggaacgaattaaaagtgcgt
gcagtgatgatgggacatccaggttcagtggaggtccagaagttccctcacgccctgatc
tccatctatctagtgctggcatttacaccctttgtgtccttcctcattgtcaatgtggct
gctgaaaaagagcagcggctgaaagacaccatgagcatgatgggactgtatgactctgcc
ttttggctttcatggggccttctctatgccgcactagtgacgaccatgtccattctcatg
gctgttatagcaacctgcacgcccctgttctccaacagcaacttctttgtcatcttcctc
ctcattttcctctatggaatatcctccattttcttctccttcatgttgacccccttgttt
aagaagccaaagtttgcgagtacagtgggctccatgctcaccgtggtgtttggatgtctg
tctcttttcactgtgctgatgagagatttcccccagtcagctgtgtggctcctctgcctt
ctgtcccccagcgccttctctatcggcattgcccaggtggtgtatctggaagctcaaggg
gacggcgctgtgttctccactctgggcattggtcctcacgccctctatgttcccatggtc
atgctgttcttggactgcattctctacctacttatagccatttacctggaccaagtgcta
ccaggcgagtttggcacaaggcgctcagtgctgtacttcctacagccatcctattggtca
aagcggaggaagcgctatgtggaggtgagctctgtgtacgagggcgaggtgaacggaacc
cctgtgaatgatgaatcagtggaggcggtttctcctgagtttagaggcaaagaggttatc
aggatctgtaatatccgtaaaatctacaaggagaaagacaccaaagtggaggctttgaga
ggtttgacttttgacatctatgagggtcagatcacagccctgctgggtcacagtggagca
ggaaaatccaccctcatgaacatcctctgtggcatctgcccccctacagaaggcacagca
accatctatggctctccagtggccgagatcgcagagggggccgagatgaaacagctggtt
ggtatatgcccccagttcaacatcatctttgatgtcctcactgtagaggaacacctgagg
atctttgctgccatcaaagggatcctgccctctgatattgacggtgaggtgaggaaggtt
ctaaaggatctggatttggaaaagattatggatgcccaggcgaagaacctgagtggaggc
cagaagaggaagctctctgtgggcatagcagttctcggagacccaaaggtcctccttctt
gatgagcctacggctggtatggacccagtgtctcggcaccaggtttggtccttactgaag
agccgtaaagcaggcagagttactgtactcagcactcattacatggatgaggcggatata
cttgcagatcgtaaagctgtcatctctcaaggacagctgaaatgtgttggttcctctttg
tacttgaagaccaaatgtggggttggctaccatctcagaatgtctgtgactgaaggctgt
gaggtggacaacatcacaccactggtcaagaatcatgttcccaaggctcagttgtcaagg
cagcaagaggctgagcttacattcacgttgcctttcgagagcatggacactttcccaggg
ctatttgcggagctagactgtcgacctgacctgggtatcattaactatggcgtctccatg
acaacgttagaggatgtattcctgcgcctagaggcagaagcagaggtggatcaggctgac
tacagtgtgtttaaccaggataaggtggaagaagagggagactcatgctctctggatgac
acggaccagaggctgctgacgttttcagacagcaggcaggatgcagtaaccggtcatgcc
ctctggaggcagcagtttagcactgtggcctggctgcacatgctcaacctgcagagagag
agaaaacctattatatacaatttgacgctgttcctggttttcttgtgtgcaatgctgatt
ctatctgtggccacaggaaacattcagattcattctcctgaaagactgttttcacctata
tacctgctgcgccgcaacgaggctcctcataaatacaccagcagcttgcttgtgcaaaac
tccacctattctgacctgacagggttcatccacaatctggagtctcagaacattaaagtg
gaaatgatgaaaaaaccagactacatgtctgctgcacctgtcagcgccgccatcaacgtg
actggatccggtaaggattttacctacattttagcatttaacagtaccaccgtgcactcc
ttgcccatggctgtcaatgtgctcagtaacgccctcctcaggggctttaacggcactgga
cgcattagaacatggactaaaccttttgactatcaaatcccagataagacgtcctacgcc
ctggtttacattgaggctgtaattcttgggatgctggctgctgggatgccagcctacttt
gcaatggaccacacaagagacagagagttgaagtgtcgctcgaccctgaggatctctggt
cttgttccttcggcgtactggtgtggtcaggcagcgattgatgtccctttctattatctc
atcttaacctgtatgaccagcaccctgtttgcctttcattctacaaacctgcttacctcc
cataacatcatgtctgtggctctgtgtctgattggcttttctccagccatggttctcttc
acatactgcgtgtccttcatgtttgtcagagtccagagcaatagggacttcttctcagtg
ctgtccatgatgttgtgtgtggtttctgcatccattgtccagctggctcttgtgaatgaa
aattctggtgtcgctcgtctcctgcataatgcactgtgtttctttagtccactttaccct
cttatgggctgccttaactgcattaccatggccaccttccttcagtcccctcatgatgat
gatttcctgtggaagaacctcttcatctcggttgtggccccgtacatccagtgtatcctg
ctgctcttcaccctgagatgtctggagatcagatatggagggaagaccatgaaaaatgac
cagctctgcaggatttcctcccaagcaaagggcaaagctcagcggaacccagaggagagt
gtgagtgaggatgaggacgttcagatggagaaagctcgagtgaaggaggcgttgacctgt
cagtgctgtgaggagaagccagtggtggtggtgagtaacctcaggaaacagtacaaaggc
aagagggaggccttttcgctccacaagagaaggaaagtggccactaagaacatctccttc
tgtgttcgcaaaggtgaggttttgggtctgctgggaccaaatggagcaggaaagagcact
ataatgcatatgctgtctggagacactgaacccaatgctggacagattctgatgggagat
tatggcacagacttccagccaatggagaaccctttggagcatgtagggtactgtcctcag
gtgaaccctctgtggcctagaatcactctacaggagcacctggagatctatgctgccatc
aaggggctgcatcaacgtgatatcccaaacatcattaagcgtgttgtgagtgctctagag
ctaaaggatcatctttacaaacaggcaaaaaacttgtctgctggtttaaagaggaagttg
tgctttgcactgagcatgctgggaaatcctcagatagttctgttggacgaaccatctaca
gggatggatcccaaatcaaaacagcgcatgtggagggcaatccgtgctgcctttaagaac
aaacagcgaggggctcttttgaccacccactacatggaagaggcggaggctgtgtgtgac
cgtgtggccatcatggtttcgggtcagctgaggtgtattggctcaattcagcacttgaag
gggaagtttgggagaggctacagcctagagattaatctcagggaggagctcacgggtctc
cagcaggtagcgctgttgcacaaagagatactgaagatatttccccatgctgctcgtcag
gacagttttgccactctgatggtgtataaaatcccaatggaagatgtgaagtcactagcc
aagtcctttgctcagttggaaagtgctaaacagaactttcactttgaagagtacaacttc
tcccagtcaacccttgaacaagttttcatggagttcgctaaagagcaggagaaggaagag
gaggaagtcggatcgcttagcacgacatttcaatggcagagactgagacaggatggccct
atatccatcaatcacgctgacagcatagtacaccagctatga
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integrated database retrieval system
