Rhinichthys klamathensis goyatoka (western speckled dace): 130080178
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Entry
130080178 CDS
T09701
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130080178 (msh4)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130080178 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
130080178
NCBI-ProteinID:
XP_056101453
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MFFTEEVTPGSSSEPGPSSSTPAQWQLNMRGRADRISSSVGSSGGGYSNSRAACESSQMF
FTEEVTPGSSSEPGPSSSTPAQWQLNTRGRADRISSSVGSSGDGYSNSRAACESSQMFFT
EEVTPGSSSEPGASSSTPAQWQMQISGRANRISSSVGSSAHSTPALSHPGRTPQRDLNMT
TSSSASASHASSVIVAVVEGRGLARGEIGMASINVKCPELVLSQFADTGTYAKVITKLHN
LMPLEILMPDTASVKGQGTKLYNLITESFPSVTFTPVLRKYFNEKKGLEYTLQLCVPEFN
TVLMEVQTKYYCLASASALLKYFEFVQNSIYAPKSLKVVFTGSEQTAMIDAISASNLELV
VNQRDHRSEHTLFGVLNYTKTAGGERRLRSNILEPLLDEVTINSRLDTIEELLQNEELFF
GLKNAIAQFPDIDELLSALVQVPKQETVPVAEAKITQIIKLKHILELVPSLKAMLQHSKT
PLLEAYYTSLDDSRFNSILDQIKSLINDDTSYMKGSLTMRTQKCYAVRPNVSEFLDIARR
AYTEVIDDIAELVAQLGEKYSLPLRTSFSNTRGFFIQMRLEGVVLPAGKLPEGFIRVTRQ
KNNCSFTTVDLMKMNDHCEEALKDIFHMSYVVVSKLLNEVYEQIYCLYKLSDAVSMLDML
LSLAHACTVSDYVRPEFTDTLAIKKGRHPILERISGQEPISNNIYISEGSNFVILTGPNM
SGKSTYLKQVALCQIMAQIGSFLPAEYASVRIADQIFTRIGVDDDFETNSSTFMVEMKEV
SYIIHNASNKSLIIIDELGRGTSPEEGIGICHSICEFFINIKAFTLFATHFLELCQLETL
YPNVENQHMQVQHVRAGDGRAEKVVYTYQLSRGHSEERNYGIRAAEMTNLPPEVIQEAKT
VSAKISQKLWAKHYSDPATRKQRADYRLATRLLQTARNSRLDPESLRHYLKALKRQYEAE
IHNATESVEIEE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcactgaagaggtgacgccgggttcgagctctgagcccgggccgagcagcagc
actccagctcaatggcagctaaatatgagaggaagagcagacaggatcagctcttctgtg
ggttcatctggtggtggttacagtaacagccgagcggcatgtgaaagcagccagatgttc
ttcactgaagaggtgacgccgggttcgagctctgagcccgggccgagcagcagcactcca
gctcaatggcagctgaatacgagaggaagagcagataggatcagctcttctgtgggttca
tctggtgatggttacagtaacagccgagcggcctgtgaaagcagccagatgttcttcact
gaagaggtgaccccgggttcgagctctgagcccggggcgagcagcagcactccagctcaa
tggcagatgcaaatcagtggaagagcaaacaggatcagctcttctgtgggttcatctgcc
cactccacacctgcactctcacaccctggccgaacccctcagcgagacctcaacatgaca
acgtcttcatctgcatctgcgtctcatgcgtcctctgtgatagtggctgtggtggaggga
cgtggtttagctcggggggagattggcatggccagtatcaatgtcaaatgcccagagctg
gtgctctcacagtttgcagacactggaacttatgctaaggtaattactaagctgcataac
ttgatgcctctggagattctgatgccagacactgctagtgtgaaaggacaaggaacaaaa
ctctacaacctcatcactgagagcttcccgtcagtcacattcactcctgttctgaggaag
tacttcaatgagaagaagggcctggagtacacactgcagctctgtgtccctgagttcaac
actgtgctgatggaggtgcaaaccaaatactactgcctggcatctgcatctgccctacta
aaatactttgagtttgttcagaactcaatatatgctcctaagtcactgaaagtggtcttc
actggcagtgagcagacagccatgattgacgcgatatcagccagcaacttggaactagtt
gtgaaccaaagagatcacaggagtgagcacactctgtttggggtcttaaactacactaag
actgccggtggggagcggcggttacgctccaatattcttgagcccctgctggatgaggtc
actatcaactcacgtttggacaccatagaggagctgttgcagaatgaagagctcttcttt
ggtctgaagaatgccattgcacagttcccggatatagatgagctgctgtctgctcttgtt
caggtcccaaagcaagagacggtaccggtggctgaagcaaaaataacgcaaataattaag
ctaaagcacattctagaactggtcccatcactgaaggcgatgctgcaacattccaaaaca
cccttgttggaagcatattatacctcacttgatgacagcaggtttaacagcattctggat
cagatcaaatcgctgattaatgatgacaccagctatatgaaaggcagtttgaccatgcgc
acacaaaagtgctatgctgtacggcccaacgtcagcgaattcttagatattgcacgacga
gcctacacagaggtgatagatgacatagcagaactggtggctcagcttggagagaagtac
agcctacccctccgaacaagtttcagcaacacacgtggcttcttcattcagatgaggctg
gagggtgtggtcttacctgcggggaagttaccagaggggttcatcagagtgaccagacag
aagaacaactgctcgttcaccactgtagacctcatgaaaatgaatgaccactgtgaggag
gctttgaaagacatttttcacatgtcttatgtggttgtgtccaagttactgaatgaggtc
tatgaacaaatctactgcctgtacaaactgtctgatgctgtgtcaatgctggacatgctg
ctctctttggctcacgcctgcactgtctcagattacgtgcgtcctgagttcactgataca
ttggcaataaagaagggtcgccaccccatcctggagcgcatttctgggcaagaacccatc
tccaacaacatctacatctctgagggaagcaattttgtgatcctaacaggccccaacatg
agtggcaagtccacctaccttaagcaggtggccctctgccagataatggctcagatagga
tcctttctgcccgcggagtacgcctctgttcgtattgcggatcagatattcaccaggata
ggagtagacgatgactttgagaccaactcttccacatttatggttgagatgaaagaggtg
tcttacatcatccacaatgcaagcaacaagtcacttatcattattgatgagctgggccga
ggcaccagtccagaggaaggcattggtatctgccacagtatctgcgaattcttcatcaat
attaaggccttcacgctctttgcaacgcactttcttgaactgtgccagttggaaactctt
taccccaacgtggagaaccagcacatgcaggttcagcacgtccgcgcaggagatggtaga
gcagagaaggtggtctacacataccagctcagccgaggacattcagaggagcgcaactat
ggtataagagcagcagagatgaccaatttaccaccagaagttattcaggaggccaaaact
gtctcagctaaaatcagccaaaagctgtgggccaagcattatagtgaccctgccactcgg
aaacagagggcagactatcgtctagccaccagactgctgcagacggcccgtaactcacgg
ttggacccagagagcctacgtcactacctgaaggccttgaaaagacagtatgaggctgaa
attcacaatgctactgagtcagtagagatagaggagtga
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