Rhinichthys klamathensis goyatoka (western speckled dace): 130080204
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Entry
130080204 CDS
T09701
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130080204 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130080204 (capn3a)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
130080204 (capn3a)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C2: calpain family
130080204 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
130080204
NCBI-ProteinID:
XP_056101484
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSDQDYNLLKQEYLQKKTLFEDETFPATV
DSLGYKELGHKSNKVKNIVWKRPKEICENPEFIVGDASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVIPQEQSFSEGYAGIFHFQFWRYGDWVDVVVDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKQLFKIMKKALARG
SLMGCSIDSLVPARFETRTTTGLVKGHAYSVTAVEECKQSQQKESKICLVRLRNPWGQVE
WNGPWSDNSKEWETISKAEKEKLQHQNAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KLHKWTVSVNEGRWIRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDDEVACTFVVAL
MQKNRRRERKLGANLFTIGFSIYEVPKEMHGNKQHMQKEFFTSNSSKARSRAYINLREVT
QRFRLSPGEYVIVPSTYEPHLEGDFILRVFSERRNTSEEIENRIEADHPVPAPASTGEES
EEDQQFLSIFQQIAGDVSTGEPLSAGGSQMEISANELKDVLNKVVSKYKDIHAECFSREN
CRSMIALMDMDGTGRLNLQEFRHLWNKIKQWQGIFKRYDFDHIGTISSYEMRNAINDAGF
RLNNQLYDIVTMRYANDNMNVDFDSFVSCLVRLEGMFRAFQAFDRGGDGTIRLNVLEWLQ
LTMYA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacgccgtctgggttcttttgcgaccggttaatccgggagagagagagaagg
gatggcgaaggctccctgagcaaacctctccgtttcagcgaccaggactacaacctcctc
aagcaggagtatctccagaaaaagaccctttttgaggatgaaaccttccctgccactgtg
gactcccttggctataaagagctgggccacaagtctaacaaagtcaagaacatcgtctgg
aagcgtcccaaggagatatgtgaaaacccagagttcattgtcggagacgctagcaggaca
gatatctgccagggagacctgggagactgctggttgcttgctgccattgcatgtctgact
ctgaacgacaagctgctatatcgtgttatacctcaagagcagagcttctctgaaggctat
gctggaattttccatttccagttctggcgttatggtgactgggtggatgttgttgttgat
gaccgcattcccaccttcaacaaccagctggtgttcaccaagtccgctgaaaggaatgaa
ttctggagtgctcttctggaaaaagcttatgctaaacttcatggctcctatgaggctctt
aagggtggaaacactgcagagggaatggaagacttcaccggtggagtgactgaattctat
gagatgaaggaggcacctaaacagctgttcaagatcatgaagaaagctctggcgagaggc
tccctcatgggctgctccattgattccctggtcccagcgcgctttgaaactcgtaccact
acaggtcttgtgaagggacatgcctactctgttaccgctgtagaggagtgtaaacagtcc
cagcagaaggagtctaaaatatgtctggtgcgtctgcgtaacccctggggtcaggtagaa
tggaacggaccttggagcgataattcaaaagagtgggaaaccatctctaaagctgaaaaa
gagaaactccagcatcagaatgctgaagatggagaattctggatgtcatttgaggatttt
aagaaaaattacacaaaaatagagatttgcaacctgacccctgatgctctggaggatgat
aagctacacaaatggacggtgtctgttaatgagggacgctggataagaggctgctctgct
ggaggatgcaggaattatccagacacattctggacaaatccacaataccgtctgcgtctt
ctggaggaagatgatgacccagaggatgatgaagtagcatgcacttttgttgttgctcta
atgcagaaaaacagacgtagagaacgcaagttgggtgcaaatctcttcactattggattt
tccatctatgaggtgccaaaggagatgcacggaaacaagcagcacatgcagaaggagttc
ttcacgtctaactcctctaaggcccgttccagggcgtacattaacctgcgagaggtgacc
cagcgtttccgcctgagtccaggggagtatgtcatcgttccctccacatacgagccccac
ctggaaggcgatttcatcctccgtgtcttctctgaaaggagaaatacctctgaggagata
gagaacaggattgaagctgatcatccagtgccggctccagcttcaactggggaagagagt
gaggaggaccagcagttcctgtccattttccagcagatcgcgggggacgtgagtactggg
gagccactgagcgctggggggagtcaaatggagatctcagccaatgaactcaaagatgta
ttgaacaaggtggtgtctaaatacaaagacatacacgctgagtgcttcagtcgagagaac
tgtagaagcatgatcgccctcatggatatggatggaacaggaagacttaatctacaagag
tttagacacttgtggaacaaaatcaaacagtggcagggaatctttaagcgctatgacttt
gatcatattggcactatcagcagctatgagatgagaaacgccatcaatgatgcagggttc
cgtctgaataaccagctgtatgacatcgtcaccatgcgctacgccaatgataacatgaac
gtcgactttgacagttttgtcagctgtcttgtacgactggaggggatgttcagagcgttc
caggcctttgatcgaggtggagacggcaccatcagacttaatgtactggagtggctccag
ctaaccatgtatgcctag
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