Rhinichthys klamathensis goyatoka (western speckled dace): 130080231
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Entry
130080231 CDS
T09701
Symbol
eprs1
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00860
Porphyrin metabolism
rkg00970
Aminoacyl-tRNA biosynthesis
rkg01100
Metabolic pathways
rkg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
130080231 (eprs1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130080231 (eprs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rkg01007
]
130080231 (eprs1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130080231 (eprs1)
Enzymes [BR:
rkg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
130080231 (eprs1)
6.1.1.17 glutamate---tRNA ligase
130080231 (eprs1)
Amino acid related enzymes [BR:
rkg01007
]
Aminoacyl-tRNA synthetase
Class I (A)
130080231 (eprs1)
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130080231 (eprs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
GST_C
Arc1p_N_like
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
130080231
NCBI-ProteinID:
XP_056101513
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MALNLTINSSNPPLGALLTAEHVKGSVNLSVKEGKDTMLRVSDDVQFSDVNSITRYLARV
APALGLYGSNMMEQTEVDHWLEFSARRLCGQSDLSSALADLDKALALRTFLVGHCVTLAE
LCIWAALKGNGESQVKPSSYPHLCRWFLFLSSQVPFSSVGSKWASKISNSKATPVEKEKK
QDLGKFVELPGAEMGKVIVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNP
EKEKEDFEKVILEDVAMLQIKPDQFTYTSDHFPTILRMGEKLLQEGKAYIDDTPPDVMKQ
EREQRVESHNRSNSVEKNLQMWEEMKKGTEFGQTCCMRAKIDMNSNNGCMRDPTLYRCKN
APHPRTGYAYKVYPTYDFACPIVDSVEGVTHALRTTEYHDRDEQFYWVINAIGLRKPHIW
EYARLNLNNTLLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGGS
RSVVNMEWDKIWAFNKKLPVSCKKVIDPIAPRYTALLSSQVVPVFISEAKEEMKEIAKHP
KNADVGMKQVWYGPKVFIEGADAETFTEGETVTFINWGNIIITKIHRDSSGAISSLDGRL
NLENTDYKKTTKITWLTESSRAPLLPAVCVNYQHLITKPVLGKDDDFKDYINKNSKIEEK
MIGDPCLKDLKKGDIIQLQRRGFYICDQPYEPISPHSCKESPCVLLYIPDGHTKEMPTAG
SKDKSKSQTAAKPVKAESAPLSKAKLAPVSSPAPSAAGDASSLFSSIVAQGDLVRQLKTG
KAPKEQVDAALKQLLALKSEFKQLTGQEYKPGMAPPTSTPGPKSSAPTPAAGSPRPSSTG
CPFTRVAEQGEVVRKLKAEKAPKEQVDAAVKQLLAVKAEFKQLTGQDYKPGMAPPTSSPP
QPAASSDASPTAIYGHVTEQGEVVRKLKAEKASKEQVDAAVKQLLALKAEYKQLTGQDYK
PGVPPAGASPSTPALPAATTLMPSGSSDSSPKSIHDRVTQQGELVRKLKTDKAPKDQVDV
AVKQLLSLKAEYKQQTGQEYKPGVPPSSGPAPAQSSSTPPQSSSSPQAQALFADIAQQGE
QLRRLKAEKAPKDQVDKAVKTLLELKGQYKALTGEEYKPVTTPGGSGNTGGEDKNRKERE
NKSEKQGGGGGGGRKQQKGGEKPQQGQDSGAGGAGEGQGPKKQTRLGLEAKKEENLADWY
SQVIIKAEMIEYYDVSGCYVLRPWSYAIWDAIKDFFDREIRKMGVENCYFPMFISQAALE
KEKTHIADFAPEVAWVTRSGKTELAEPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWC
SVVRWEFKHPQPFLRTREFLWQEGHTAFATKEEAAEEVLQILDLYTRVYEELMAIPVVKG
RKTEKEKFAGGDYTTTVEAYISASGRAIQGATSHHLGQNFSRMFEIVFEDPKRPGEKQLA
FQNSWGITTRTIGVLTMVHGDNMGLVLPPRVACLQVVIIPCGITATLPEAEKDLLLAQCS
KYLSRLQEANIRVKADLRDNYSPGWKFNHWELKGVPIRFEVGPKDLKQGQFVAVRRDTGQ
KITVPEADAVKRIPILLEEIQNNLFKRASDDLNKHMVVADTMEQFQKDLDQGRIVQIPFC
GGIECEDWIKKITAKDQDLEPGAPSMGAKSLCIPFNPLKTLQAGQMCVSGKEPAQYYTLF
GRSY
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaacttgactatcaacagtagcaacccacctctaggggcactgttgactgct
gaacatgtgaagggcagcgtcaatctctctgtgaaggagggcaaagacaccatgctccgt
gtctctgacgatgtacagttcagtgacgtgaactccatcacccgttatcttgcccgagtg
gctccggcattgggactgtatggttctaacatgatggagcaaactgaggttgatcactgg
ctggagttcagtgcccgtcgtctctgtggtcagtcagatctgtcttctgctctggcagat
ctggataaagctctggcactgagaacattcctggtgggtcactgtgtgacactggctgaa
ctctgcatctgggctgctctcaaaggaaatggcgagtcacaggtcaagccaagctcctat
ccgcatctgtgccgctggtttttgttcctgagctctcaggtgccattcagctctgtgggc
agtaaatgggccagcaagatttccaacagcaaagccactcctgtggagaaggaaaagaag
caggatctgggaaagtttgtggagctccctggtgctgagatgggcaaagtaattgtgcgg
tttccccctgaggctagtggatacctgcacatcggtcatgccaaggcagctctactcaac
cagcactaccaggtcaatttcaagggcaagctcatcatgcgttttgatgacacaaaccct
gagaaggagaaagaagactttgagaaggtcatcttggaagacgtggccatgctacagatc
aaaccagaccagttcacctacaccagcgatcactttcccactatcctgcgtatgggggag
aaacttctacaggagggcaaggcctacatagatgacactcctccagacgtcatgaaacaa
gaaagggagcaaagggtcgagtctcacaaccgcagcaactctgtggagaagaacttgcag
atgtgggaggagatgaagaaaggcacagagtttggccagacctgctgcatgagagcgaag
attgacatgaattccaacaatggctgcatgcgtgaccccacactctaccgctgcaagaac
gctcctcatcctcgcaccggctacgcttacaaagtgtaccccacatatgattttgcgtgc
cccattgtggacagtgttgagggggtgactcatgccttgcgtaccactgagtaccatgac
cgagacgagcagttctactgggtaataaatgctattggtctgcgtaaaccgcacatctgg
gagtacgccagactcaatcttaacaacactttgctctccaagaggaagctcacctggttt
gtcgaccagggctatgtggatggctgggatgaccctcgtttccccacagtcagaggtgtg
ctacgtagaggaatgactgtggagggactcaaacaattcattgctgctcagggaggctcg
agatctgtagtcaatatggagtgggacaagatctgggcgttcaacaagaagctgccagtt
agctgtaaaaaggtcattgacccaatagccccaagatacactgccctactaagctcgcag
gttgtgccagtcttcatttctgaagccaaggaggaaatgaaagagattgccaagcatccc
aagaatgcagatgtgggaatgaagcaggtgtggtacgggccaaaggtctttatcgagggt
gctgacgcagaaactttcacagagggtgagaccgtgaccttcatcaactggggaaatatc
atcatcaccaaaatccacagggacagcagtggagcgatctcgtctctagatggtcgtctg
aacctggagaacactgattataaaaagaccactaagatcacctggctcactgaatccagc
cgtgcccccctcctgcctgctgtgtgcgtcaactaccagcacctcattaccaaaccagtc
ttgggcaaggatgatgatttcaaggattacatcaacaagaacagcaagatagaggagaag
atgataggagacccttgtctgaaggacttgaagaaaggtgacatcatacagctgcagaga
cggggtttctatatctgtgatcagccgtatgagccaatcagcccccacagctgcaaggag
agtccctgtgtcctgctctatatcccagacggacacacaaaagagatgcccactgctggc
tccaaggacaagagcaagagccagacagccgctaaacctgtgaaggctgagtctgctcct
ctgagcaaagccaagctggctcctgtctccagccctgctccatcagcagcaggagacgct
tcctctctattctccagcattgtggctcagggagacctggtcagacagctcaagacaggc
aaggcccctaaagagcaagtggacgccgcattaaagcagctcttggccttgaagtctgag
tttaaacaactgaccggacaggagtacaaacctggtatggccccacctacttccacccca
ggaccgaagagctctgcccccacccctgcagcaggaagtccgaggccttcctccaccggt
tgtccgttcactcgtgttgctgagcagggcgaggtggtcagaaaactgaaggctgaaaaa
gcacccaaggagcaagtagatgctgcagtaaaacagctcttggctgtcaaagctgagttc
aaacagctcactggtcaagactacaaaccaggcatggctcctcccacatcatctcctcca
cagcccgccgcttcatctgacgcctccccaactgccatatatgggcatgtgactgaacag
ggggaggtggtcagaaagctgaaagctgagaaagcatcaaaagaacaggttgatgcagca
gtgaagcagcttttggctctgaaggcagaatataagcagttgacagggcaggactacaaa
cctggagttccccccgctggtgcttctccatcaactccagctctgcctgccgccaccacc
cttatgccgtctggctcctctgacagctctcctaagtctattcatgatcgagtcactcaa
caaggagaacttgtgaggaaactgaaaacagacaaggcacccaaggatcaggtagatgtg
gctgtgaagcagttgctgagtcttaaagctgagtacaaacagcaaactggacaggaatac
aaaccaggcgtgcctccttcctctggtcccgcccctgcacagtctagcagcaccccacct
caatccagctcctcccctcaggctcaagcactgtttgcagacatagcccagcagggtgag
caactgagacggcttaaagcagagaaagctcctaaggatcaagttgataaagcggtgaaa
actctgcttgagctaaagggtcagtataaagccctcactggagaggaatacaagcctgtg
actaccccaggaggctctgggaacacagggggggaagacaagaaccgcaaggagcgggag
aacaaatctgagaagcagggtggaggaggaggaggaggacgtaagcagcagaagggagga
gagaaacctcaacaaggtcaagactctggagcaggtggagcaggagaaggccaggggcca
aagaaacagacacggctgggactggaggcaaagaaagaggaaaacttggctgattggtac
tcacaggtgatcattaaggcagagatgattgaatactacgatgtcagcggttgttacgtg
ttgaggccctggtcttatgctatctgggatgccatcaaagatttctttgatcgggagatc
aggaagatgggtgtggagaactgctacttccccatgtttatctctcaagctgcccttgag
aaagagaaaacccacattgcagattttgctccagaggttgcttgggtgacaagatcagga
aagacagagctggcggagcccatcgctatacgtcccactagtgagacagtgatgtatccc
gcctatgccaagtgggtccagtcacacagagatctgcccatcaaactcaaccagtggtgc
agtgttgtgcgttgggagtttaaacacccacagcccttcctgagaaccagagagtttctt
tggcaggagggacacacagcgtttgccaccaaagaggaagctgcagaggaggtgttgcag
attttggacctgtatactcgggtgtacgaggagctgatggccatccctgtggtcaagggc
aggaaaacagagaaggagaagtttgcaggaggagattacactaccactgtggaggcttac
atctcagcgagcggcagagcaattcagggtgccacatcccatcacctgggccagaacttc
tccagaatgtttgagattgtttttgaggaccctaagagaccaggcgagaagcagctggcc
ttccagaactcatggggaatcaccactcggaccatcggagtcctgacgatggttcatgga
gacaacatgggcctggtgctgccacccagagtagcatgtctacaggtcgtcatcattcct
tgtggcatcacagccactctgccagaagcagagaaagaccttctgttggcccagtgctcc
aagtatctttccagactacaggaggccaatatcagagtcaaggccgacctgcgggataat
tactcgcctggctggaagttcaatcattgggagctgaagggtgtgcccataaggtttgag
gttgggccgaaggacttaaaacagggccagtttgtagcagtaaggagagacacgggacag
aaaatcaccgtgccagaggctgatgccgtgaagagaatcccaatccttctggaagagatc
cagaacaatctctttaaacgggcctctgatgatttgaacaaacacatggttgtggccgat
acgatggaacaattccagaaagatctggaccagggaaggattgtacagattcccttctgt
ggaggcattgagtgtgaggactggattaagaagataacagccaaggatcaagacctggag
cctggtgcaccttcaatgggagccaagagtctgtgtatccccttcaaccccttgaagacc
ctgcaggccggccagatgtgcgtcagcggcaaagagcctgctcagtactacacgttgttc
ggtcgcagttactga
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integrated database retrieval system
