Rhinichthys klamathensis goyatoka (western speckled dace): 130080251
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Entry
130080251 CDS
T09701
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
130080251 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130080251 (zfp36l1a)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130080251 (zfp36l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Motif
Other DBs
NCBI-GeneID:
130080251
NCBI-ProteinID:
XP_056101546
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All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MTTAVLSPFFDFSEVISNKNKMLNYSNNILSTPHPVSVPCTGASLPISNPTGCLLDRKAV
GTPSTGVYQRRHSVTLASTKLNQNQFLNIAKADPSLLGSGTGTTGSSNKENRLRDRSFSE
TGDRLLQKCSGPGGPNSQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLSRHP
KYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPPTPSPLSASNKMDRPRLQHSYSFAG
FPSSGGLRDSPTSVTPPPIFPPDDLPDWPSSNPFTYSSQELANLFSPSLGSAPLSCSDPS
TQAPSSPTPTPYYFRAMSESPQLYESPSSQPDSLSDQEGYQSSSSGSLSGSESPVLDTTR
RLPIFSRLSISDD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccgtgttgtcgcctttcttcgactttagcgaagtgatcagcaacaagaac
aaaatgctgaactacagtaacaacatcctcagtacaccgcaccctgtctctgtcccttgc
acgggggcaagtctgcccatctccaaccccactgggtgcctgctggacaggaaggctgtg
gggacaccctccactggggtttaccagcgccggcactctgtcactttggctagcaccaaa
ctcaaccaaaaccagttcttgaacattgctaaggcagatccttccctgctcggctcaggg
acaggaaccaccggcagcagcaacaaagagaaccgacttcgagaccgctctttctccgag
acgggggatcgcctgctacagaagtgttcgggccctggaggccccaacagccaggtcaac
tcgagccgttacaagacggagttatgcaggccattcgaggagaacggtgcctgcaagtac
ggtgacaaatgccagtttgcccatggcattcatgagttgcgcagcctcagccgccatccc
aagtacaagacggagctctgccgcacattccacacgatcggcttctgcccctacggcccg
cgatgccacttcatccacaatgcagaggagcgccgcggacctcctccaaccccatccccc
ctttcggcctccaacaagatggacaggccacggctgcaacacagctacagctttgcgggg
ttccccagctctggaggcttgagggacagtcccacctctgtcacccctccacctatattt
ccgcctgacgatctccccgactggcctagcagcaacccgttcacgtattccagccaggag
ctggccaacctcttcagccccagcctgggaagtgcacctttgtcctgctccgacccttcc
acccaggcgccatcttccccaacgccaaccccttactacttcagggccatgtcagagtct
ccccaactctatgagtctccatccagtcagccagattcgctttctgaccaagagggctac
cagagcagctcgagcggaagtctgagtggctctgaatctcccgtccttgacaccacccgc
cgactgcccatcttcagcaggctttccatctctgatgactaa
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