Rhinichthys klamathensis goyatoka (western speckled dace): 130080385
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Entry
130080385 CDS
T09701
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130080385 (irx5b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130080385 (irx5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130080385
NCBI-ProteinID:
XP_056101713
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MAFPQGYLYQSSLSLYSCPPYGPGAVPGARADDLGRSSSGSAFAPYASSSFTNTALFNSL
QYSPESTAPFTSYGGSPYESSPGMAGSIGYHPYAGPLGAYPFGDPAYRKNATRDATATLK
AWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSEDED
EEDSIDLEKNDEDDEPLKTAETTQTTKDAVGDERAGDRDDATDSVIIDCEEEENRTVSES
PVPTTSSPQNELSESKTAVSENCNATSVIHSAIPTPKPKLWSLAEIATSDKRADASSPAG
SPAQCLFPPTRFYYTSPFYAGFTNYGAFGALNGSASNSTLLNGINQTALHRARDSKLTQD
TSTDLTFQHRRPNV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttccacagggatacttgtaccagtcttcactgtctctgtactcgtgtcccccg
tacggccccggcgcggtcccgggagcgcgggctgatgatctgggacgctcctctagcgga
tccgccttcgccccgtacgcgtcctcatccttcacaaacactgcactcttcaactccctc
cagtacagtcccgagtccaccgcccccttcacttcatacgggggctccccatatgagtct
tctccgggcatggcgggctccatcggctatcacccgtacgccggtcccctgggcgcgtac
ccgttcggagaccccgcgtaccggaagaacgcgacgcgcgacgccaccgccaccctgaag
gcctggctcagcgaacacaggaaaaacccttatcccaccaagggcgagaagatcatgctg
gccatcatcactaaaatgaccctcactcaggtgtccacctggttcgccaacgcccggagg
aggctgaagaaagagaacaaaatgacgtggacgccacggaacaggagtgaggatgaagat
gaggaggatagtattgatttagagaaaaatgatgaagacgatgaaccgctcaaaacagcc
gaaacaacacagacgaccaaagatgcagttggcgacgaacgcgcgggagatcgcgacgac
gcgacggatagcgtcatcatcgactgtgaggaagaggagaatcggacagtctctgagtct
ccggtgcccacgacctcctctccccaaaacgagctgagtgaaagcaagacggccgtcagt
gagaactgcaacgccacctctgtcattcattctgcgatcccgacccctaaacccaagctg
tggtctctcgctgaaatcgctacctcggataagcgagccgacgcgtcgtcgcccgccggg
tcccccgcgcagtgcctgttcccccccacgcgtttctactacacgtctccgttctacgcg
ggattcacgaactacggcgcgttcggagcgctgaacggctccgcgtcaaactcaacgctt
ctgaacgggattaaccagactgcgttacacagagcgagagacagcaaactgacgcaggac
acgagcacagatctcacgtttcagcaccggaggccgaatgtgtag
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