Rhinichthys klamathensis goyatoka (western speckled dace): 130080386
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Entry
130080386 CDS
T09701
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137
Mitophagy - animal
rkg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130080386 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130080386 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130080386 (amfra)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
130080386 (amfra)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130080386 (amfra)
Multi subunit type E3
ERAD complex
130080386 (amfra)
LMBR1L-GP78-UBAC2 complex
130080386 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
130080386
NCBI-ProteinID:
XP_056101714
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MPLLFLERFPWPSLHTYTALSTVLLAGTILSAYSSVRDSEDSSPLAGDPHSGPDEEEIKL
DPLENLGNMATSVLVYLITDSLFVWVMVNTACCILMLIAKVIQCIVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPM
GSHVRVLSLLVSVLLCCGGLAVLCAVVGHLHGMHTVAFMAAECLLVTVRTGHVIIRYSIH
LWDLNHEGTWENKSSYIYYTDFIMELAILCLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVIDNMESRFAVATPEELLANNDDCAICWDSMTTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNISEGVREREEGQREVLDENMPAGPGAEARPHINQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLNAMAHQIQEMFPQVPYHLILQDL
QLTRSVEVTTDNILEGRIQVPFPTQSVERAPLQGNTGPDESAGASSGSEVAAPEPQDFEV
RGSRFSKSADERQRMLMQRKDELLLRARRRYLHKKPDEGDVFPSADNDDAMPSMEDEDSD
SVTLRRRRMAAAAERRMQRHEPSPF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagcgcttcccctggcccagcttacacacatacactgccctg
agcactgttctgctggctgggaccatcctgagtgcctacagctcggtcagagactcagag
gactcctctcctctggctggagacccacacagcggccctgatgaggaggagatcaagctg
gatccgctggagaacttggggaacatggccaccagtgtgcttgtgtatctcatcacggac
agcctgtttgtctgggtgatggtgaacacggcgtgctgcatcctcatgttgatcgctaaa
gtgatccagtgcattgtgttcggcccgctgagagtcagtgagaaacagcatctgaaagat
aagttctggaacttcatcttctacaagttcatcttcatcttcggcgtgctgaacgtgcag
cgggtggaggaggtggtgctgtggtgtctgtggttctccatgctcatcttcctgcatctg
atggtgcagctctgcaaagaccgctttgaatacctctcgttctctcccacgaccccgatg
ggcagtcacgtgcgcgtgctgtctctgctggtgtctgtgctgctgtgctgtgggggtctg
gctgtgctctgcgctgtagtcgggcatcttcacggcatgcacactgtggccttcatggca
gcggagtgtttgctggtgaccgtacgcacaggacacgtcatcatacggtactccattcac
ctgtgggacctgaaccacgagggcacctgggagaacaagagctcatacatctactacact
gacttcatcatggagttggccatcctctgcctggacctgatgcatcacatccatatgctg
ctctttggaaacatctggttgtccatggctagtcttgtgatctttatgcaactgcggtat
ctcttccacgaggtgcagcgaaggattcgccgccacaaaaactacttgcgtgttattgac
aatatggaatccaggtttgctgtggcaacgcctgaagagctgttggctaataacgatgat
tgtgcgatctgctgggattcaatgactaccgcgcgcaagctgccctgtggacatctcttc
cacaattcgtgtctgcgctcttggctggagcaggacacgtcctgtcccacgtgccgcatg
tctctgaacatcagtgaaggcgtgagagagcgagaggagggccagagggaggtgctggat
gagaacatgcccgctgggccaggagcagaggcccgaccacacatcaaccagcacaatcac
ttcttccacttcgatgggtcccgcattgccagctggctgccgagtttctcagtggaggtc
atgcacaccaccaacatcctgggcatcgcacaagccaacaactcccagctcaatgccatg
gcccatcagatccaggaaatgtttccacaagtcccttatcatctgatcctgcaggatttg
cagctcacacgctctgtagaggtcaccactgataacatcctggagggccggatacaggtg
ccgttccccacacagtctgtggagcgcgcacccctgcaggggaacactggtcctgacgag
tcagcgggggccagcagcgggtccgaggtcgcggcccctgagccgcaagacttcgaggtt
cgcgggagccgcttctccaagtctgcggatgaaagacagaggatgctcatgcagaggaag
gatgagctgctcctgagagcgcgcagacgttatcttcacaaaaagccagatgaaggagat
gtgtttccttctgctgataacgacgacgccatgccctcgatggaggacgaggactcggac
tccgtgacgctgcggcgcaggaggatggcggccgctgcggagcgacgcatgcagaggcac
gagccttccccgttctga
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integrated database retrieval system
