Rhinichthys klamathensis goyatoka (western speckled dace): 130080402
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Entry
130080402 CDS
T09701
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130080402 (sntb2)
BRITE hierarchy
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Tricorn_PDZ
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
130080402
NCBI-ProteinID:
XP_056101730
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All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MAVWTRAEKQGHLDLLLSDRWVRVSAELTRDTLTLTAEGEPGGPAGYSEHNSHLRNGVSN
GNEQNRDVFQSRGQYDSPGRFNGTGSDSESSGYCDQAGPEGVRRVRIVKQESGGLGISIK
GGRENRMPILISKIFPGLAADQSRALRVGDAILSVNGSDLRDATHDAAVQALKKAGKEVT
LEVKYIREVSPLFKKSSMSADLPWDGHLQSPNLSGSDESPKSSVTRDRKVIPLKMSFISR
NLTMPDLENRLLELHSPDGQHTVVLRCKDGATAHSWFTAIHTNIAALLPQMLAHINSFLS
NPSANTHCTLKHIGWLAEQLELDGGRHQHRRVIMALTEKDILLFQSVPWTYESWTSPLLT
HPLLATRLVHSGSVRSSPALGADLVFATRTGTGRGIESHVFRVETHWDLSTWTRALVQGG
HSAAELIKEVSIGCVLNGQDVCLILHYERGFTVTRESGESVLFHFPYERLKMSADDGVRN
LYLDFGAPEGEMVFELHSGPKPVVFVLHSFLSAKLARLGLLT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggacccgcgcggagaaacagggtcatctggacctgctcctgagtgaccgc
tgggtccgggtctccgcggaactcacacgggacactctcacactgacggcggagggcgaa
ccgggcgggcccgcgggatattcggagcacaactcgcatttaagaaacggcgtttccaat
ggcaacgaacagaaccgagatgtttttcagagccgcgggcaatacgacagccctggtcgg
ttcaacgggaccggttcagactcagagtccagcggttactgtgaccaggcggggccggag
ggggttcggagggttcggatagtcaagcaggagtccggcggactggggatcagtattaaa
gggggtcgggagaaccgcatgcccatcctcatatcaaagatcttccccggtttagcggcg
gatcagagtcgagccctgcgcgtcggcgacgcgatcctgtccgtcaacggcagcgacctc
cgcgacgccacgcacgacgcggcggtgcaggcgctgaagaaggccgggaaggaggtgacg
ctggaggtgaagtacatcagggaggtgtctccgctctttaagaagtcctctatgagtgca
gatctgccttgggatggacatcttcagtctccaaacctcagcggcagcgacgagtcgccc
aagagcagtgtaactcgtgacagaaaggtcatcccacttaaaatgagcttcatcagccga
aacctcaccatgcctgacctggaaaacaggttgttggagcttcactctccggacggccag
cacactgtggtgttgcggtgtaaagacggcgccactgctcactcctggttcacggccatc
cacacaaacattgctgccctattgccacagatgctggcccacatcaactccttcttgagc
aaccctagcgccaacacacactgcacgctcaaacacatcggctggctggcagagcagctt
gagctggatggcgggcggcatcagcacagacgtgtcatcatggcgctcacggagaaagac
atcttgctgttccagtcagtgccatggacgtatgagagctggacctctcctctcttaaca
cacccactactcgccacacggcttgttcactcaggcagcgtccgcagttctccggctctg
ggtgcagatttggtgtttgctacacgtacaggcacaggtcgaggaatcgagtctcatgtg
tttcgtgtggagacacactgggatctgtccacatggacacgtgcactggtgcagggcgga
cattcggctgctgaactcatcaaagaggtttccataggctgtgtgttgaacggacaggac
gtttgtctgatcctgcattatgaaagaggtttcaccgtgacacgggaatctggtgaatct
gtgctgttccacttcccttatgagcggctcaaaatgtctgcggatgatggagtcaggaat
ctttacctggactttggtgctccagagggcgaaatggtgtttgagcttcactcggggccg
aagcctgtggtcttcgtgcttcattcctttctctccgccaaactggctcgcttgggactg
ctcacataa
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