Rhinichthys klamathensis goyatoka (western speckled dace): 130080513
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Entry
130080513 CDS
T09701
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130080513 (arid5b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
ARID
130080513 (arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
130080513
NCBI-ProteinID:
XP_056101850
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MEPNSLLWVGSPCGLHGPYIFYKAFRFHLEGKARILSLGDFFLVRCKAGDPICIAELQLL
WEERTTKQLLSSSKLYFLPEDTPQGRNVTHGEDEVIAVSEKVIVKLEDLVKWTVADLWSW
KKGLRAVPLKPTVLKELGKNGQREALHRYRESTLNSGLNFKDVLKEKAELGDDAEEKKVL
VLSYPQYCRYRSIIARLRERPNSLLTDHVVLALGGIASLTNNTQILYCRDTFEHPTLVEN
ESVCDEFAPNLKGRPRKKKLSISQRRDSQGQSGIAKEPNGVEGKSLFKMKVDTKSGLPKP
RNNSGSSWKKVPSEDKPKVEGGEECRTDEQAFLVALYKYMKERKTPIERIPYLGFKQINL
WTMFQAAQKLGGYEVITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERFTKGE
EDKPLPPVKPRKQEGSVQEAIVKTKMMAIKRPKDEQKPVPLNEMDISAKVTELGMEDTEQ
LQEKQDSQQSLALTPMDREAKSPLPEDEGVQLVIKDEDQPVLHNTYEHANGNVLPSLPQD
DAPLKSEDCDVFPVAAMPLHHSHPLPNSHTPDQWQHGMLEYKVPPGALANIEQSRPKEGQ
NQVGMVLPTIKQKPATSPEIPPERAEPIKKEEACFNLNPLLYPRGNPGIMSPLAKKKMLS
QVSGTGLLNNYPYGPPPPLVSRRLSSSSTEYSSAGQQSSHAPSTAETNMVIKRPSVIQHA
QSFKSRGSEDRRSSTEGSQKDGCSEGEPIPQPQPTPIREPYIMRADPISSMEKSAEMPRP
GKAPSFLSDFYSSPHLHNLCRQTEHHLSKEQISKYLSRDIYPRDCETAQGFPPSQHPDNV
GVNFCARLSQKEKGPPAERVTEEQPTDLSLPKSSPHKLPLSSSSRTCIPHPTMQQDIKNS
PLFQAGNSQSSSIDYHPRACRVPPMTVSSSKKVNESHSKVLEKSHNGRGEETSSYKIDEM
ARPILSAKSSPQNICTARPLKRSVEDLENGPSEKKIRAVTPLHCSTQRDGPGKPRTPEAD
SDSMKPAEPAHAVHINSYISEGHKIPLHSHLFQGLYPGTFVSQVQDMCESLGSHVTPSYS
HPLQYLKNQAVLSPLMPPFAIHSLMMQRQFLATNPAHMYRHQMGTSYGDILHPGLYPMSA
LHPQPAFSPPQLSSVHPSTKLS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcctgtgggtaggctcaccttgtggtttgcacggaccttacatt
ttctacaaggcgtttagatttcaccttgaaggcaaagcgagaattttgtccctgggtgat
tttttcctggtcagatgtaaagcaggggaccccatctgcatagcagaactacagctctta
tgggaggaaaggacaaccaagcaacttctatcaagctccaaactttattttctcccagaa
gatactccccagggcagaaatgtcactcacggagaggatgaagttatcgccgtctcagaa
aaagtcattgtgaagttggaggatctggtgaaatggaccgtcgcggatttgtggagttgg
aagaagggtctgcgggccgtacccctgaaacccaccgtgctgaaggagctcggcaagaac
ggccagagagaagcgctgcacagatacagagagtccacgctcaacagcggcctcaacttc
aaggacgtcctcaaagagaaggctgaactcggtgatgatgcagaggaaaagaaggttctg
gtattgagttacccccagtactgtcggtaccgctccatcatcgcgcggcttcgggagagg
ccaaactccctcctgacggaccatgtggtgctggccctgggaggaatcgcctccctcacc
aacaacacacagatcctgtactgcagggacactttcgagcaccctacgctggttgagaac
gagagtgtctgtgatgaatttgctcccaacctgaagggccggccccggaagaagaagctc
tccatctcccagcggcgagactcgcaggggcagagcggtattgccaaggagcccaacggc
gtggagggcaagtctcttttcaagatgaaggtggacacaaaatcaggactgcccaagccc
agaaacaacagtggcagcagttggaaaaaagtgccgtccgaggacaagccaaaggttgaa
ggaggtgaggagtgccggacagatgagcaggccttcctggtggcactgtataagtacatg
aaagagaggaaaactcccatcgagaggataccgtacctgggcttcaaacagataaacctt
tggactatgtttcaagcggctcagaaactgggaggatacgaggtgatcacagcgcgacgc
cagtggaaaaatgtatatgatgaactgggcggcaacccgggaagcactagcgccgccacg
tgcacacggagacactacgagaggctcatcctaccctatgagaggtttactaaaggagag
gaggacaaaccccttccgccggtcaaaccccgcaaacaggagggcagtgtccaggaggcc
attgtcaaaacaaagatgatggccatcaagcgccctaaggatgaacaaaaaccggtgcct
ctgaacgaaatggacatctcagctaaagtcacagagctggggatggaggacacggaacag
ctccaggagaagcaggatagccaacagtccctggctctaaccccgatggacagagaagca
aagagtcctcttcctgaagatgaaggtgtgcagctagtaatcaaggatgaagatcaacct
gtgctccacaacacatatgagcatgcaaatgggaatgttttgccctcacttccacaagat
gatgcaccactcaagtcagaggattgtgacgtgtttcctgttgctgccatgccgctgcac
cacagtcatcctctcccaaactctcacacaccggaccaatggcagcatgggatgctggaa
tacaaggtacctccaggtgcccttgcaaacattgaacagtctaggccaaaagagggccaa
aaccaggtgggaatggtgctgccgaccattaagcagaaaccagccacatctcctgaaatc
ccacctgaaagggccgagcccattaaaaaggaagaagcatgcttcaatttgaatcctctc
ctctacccaaggggtaatcctggcatcatgtccccattagctaagaagaagatgctgtcc
caagtcagtggaacaggactgcttaataattacccatatggaccaccacctccattggtc
agtaggaggttatctagcagtagtacagaatactcatctgctggacagcagagctcccat
gctccttccactgcggagaccaacatggtgatcaaacgaccatcagttattcagcatgct
cagagcttcaagtccaggggtagtgaggacaggaggtcctcaacagagggctctcagaaa
gacgggtgtagtgagggagaaccaataccccagccacagcctaccccgataagagagccg
tacattatgagggccgaccccatttccagcatggagaaatctgctgagatgcctcgtcct
ggcaaggctcccagcttcctgagtgacttttactcctcaccacacctacacaatctctgc
cgacaaactgagcaccacctgagcaaggagcagataagcaagtatcttagcagagacatt
taccctcgagactgtgagaccgcccagggttttcccccaagtcagcatcccgacaatgtg
ggtgtgaatttctgtgcccggcttagtcagaaagaaaagggacctcctgcagaaagggta
acagaggagcaaccaactgatttgagtctcccaaaatcctctcctcacaaactgcctctt
tcctcatcctctcgcacttgcatcccacatcccacaatgcaacaggacattaaaaactct
cctctctttcaagcaggcaacagtcagagctcaagcatagattaccatcccagggcctgt
cgtgttcctcccatgaccgtgtcctcgtctaaaaaggtaaacgaatctcattcaaaggtt
ctggagaaatcacacaacggcagaggagaagagacctcgagctacaagatcgatgagatg
gctcggcccattctgagtgcaaaaagcagcccacagaatatttgcacagcacggccactg
aaaaggagcgttgaggatttggagaacggaccatcggagaagaagatccgggctgtgaca
cccttgcactgctcgacacaaagagacggcccggggaaaccaaggacgccggaagctgac
agtgactccatgaagccagcagaacctgctcatgcagtgcacatcaacagttacatttca
gagggccacaagatccccttgcactcccacctattccaagggctgtatccagggacattt
gtatctcaggtccaggacatgtgtgagagcttgggctcccacgtcaccccaagttactcc
catccactgcagtacttgaagaaccaggctgttctgtcaccactcatgccccccttcgcc
attcattccttaatgatgcaaagacagttcctggccaccaatcccgcccacatgtacagg
caccaaatgggcacctcatacggggacattctgcaccctggcctctaccccatgtcggcc
cttcacccccagccagctttcagtccccctcaactctcttcagtgcaccccagcactaaa
ctttcctag
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