Rhinichthys klamathensis goyatoka (western speckled dace): 130080566
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Entry
130080566 CDS
T09701
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130080566 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130080566 (nup43)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130080566 (nup43)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130080566 (nup43)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130080566 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
EIF3I
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_WDR75_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WD40_RFWD3
KNTC1_N
Beta-prop_CAF1B_HIR1
PSII_BNR
WD40_CFAP43
CRR42-like
Motif
Other DBs
NCBI-GeneID:
130080566
NCBI-ProteinID:
XP_056101996
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MDSINAKYISQKISKTRWRPVSAASLQQPELFATGSWDNENNKVSIWSVGDHGVSNMDGE
FDEEPQLLCDFQHDGDVLDLQFLDQDRLVSASSSGAVTIFKLQSDCQALSSAHVWERAHQ
YSCDDAPCTSVVCRSPEIVSVGEDGRVILYKADQTEVVRVIENADSSTIHAVTFLRTTEV
LTVNSIGQLKMWDFRQQSDSPAQILSLTGDRVPLHCVDKHPNQQHIVATGGQDGMLCIWD
VRQGNTPFSLIEAHSAEMWEVHFHPSNPNHLFTCSEDGSLLHWETTSGSDMSTLLQRGWN
SRVISHSAVPQAGENDSVVSAWLAGDSSRSRLEATHMLPGQTLSVNSLDVLEQCLVCGTD
GEAVYIHRQVPV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggactccatcaacgccaaatacatctcccagaagatcagcaagacgcgctggcggccc
gtgtctgcggcctcgctgcagcagccggagcttttcgccacgggatcctgggacaacgag
aataacaaagtgtcgatctggtcggtgggcgatcatggagtgtcaaacatggatggagag
tttgatgaagagcctcagttactgtgtgacttccagcatgacggagacgtgctggacctg
cagtttctagatcaagacaggctcgtttctgcatcatcaagtggggctgtgactattttc
aagcttcagtctgactgtcaggctctgtcatcggctcatgtgtgggagagagctcatcag
tactcctgtgatgatgcgccctgcacctcggtcgtgtgcagaagccctgaaatagtgtcc
gtgggtgaggacgggcgagttattctgtacaaggccgatcagaccgaggtcgtacgtgtt
attgaaaatgcagatagcagtacgattcatgccgtgacgtttctaaggacgactgaagtt
ctcacggttaactccatcggtcagctgaagatgtgggacttcagacagcagagcgacagt
ccggcacaaatcctctctctcactggggacagagtgcccttgcactgtgtggataagcac
ccaaaccagcagcacatagtggccacaggagggcaggacgggatgctgtgtatctgggat
gtgagacagggcaatacgcccttctctctcatagaggcacattcagcagaaatgtgggaa
gtacattttcatccatcaaaccccaatcacttgtttacatgctcagaggatgggtctctg
ctacactgggagacgacttccggatcagacatgagcactctcctgcagaggggctggaac
agcagggtcatctcgcacagtgccgttccccaagcaggggagaatgactcggtggtcagt
gcctggctggccggggactccagcagaagtagactggaggcgactcatatgctgcccggc
cagacactgtctgtcaacagtctggatgtgcttgagcagtgtttagtgtgtgggactgat
ggggaggctgtgtacatccacagacaagttcctgtttga
DBGET
integrated database retrieval system
