Rhinichthys klamathensis goyatoka (western speckled dace): 130080608
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Entry
130080608 CDS
T09701
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04514
Cell adhesion molecules
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130080608
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130080608
09142 Cell motility
04810 Regulation of actin cytoskeleton
130080608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130080608
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130080608
04515 Cell adhesion molecules [BR:
rkg04515
]
130080608
04090 CD molecules [BR:
rkg04090
]
130080608
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130080608
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130080608
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130080608
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin alpha subunits
130080608
CD molecules [BR:
rkg04090
]
Proteins
130080608
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
130080608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
vWA_SIBA-E
Copine
Motif
Other DBs
NCBI-GeneID:
130080608
NCBI-ProteinID:
XP_056102016
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MDQNFCIRLCILCASQSVMAFNIDPVSWKTFTAPSPSQSQNVAFGYKVIQKDASSLLVSD
PLIQHHQTQRGQIYRCAVTEGNCTPLSITVTNEAVNMSLGLSMSLDPQSSTAVVCGPTIP
KTCDVTTTYNGMCFKISPDNVVSRSVPETLRECPSSQIDIAFLMDGSGSVNYPDFIKMKA
FVIEMIKSFVYRDTQFAIAQFSTECVIHYKFQQVQNAMAWEDAVNKISQQRGWTYTAKAI
RHLVDELFVSSGGVRPSATKILVVITDGESTDSKLLTEAVQHAQAKHITRYAIGVGDAFD
NDEAIRELAIIASLPTNRHVFKVTNFDALESIREKLKENIIAIEGTQTSGDSSRMEFAQD
GFSAAFTSNTDMIMTAVGAFQWKGGYQLYKNDISDQSFKPNSVFQAGSEHDSYLGYSLTI
ATMSRAKYAVMGAPRHKHKGQVTVSRIDRSDLKQLDSPKPQIGSYFGAEVCVVDLNSDSY
TDLLLVSAPTYTESDREGLVFVYIITRRANFIFSDTLVGMAGQRGRFGSSLASPADLNGD
GFRDVLVGAPLEEDGLGSIYIFNGIDGGVISKYSQRIAGSSVQPGLRFFGISLSQSSLDQ
TRDRLPDIAVGSKGAVLLLRSRPIMLLETKVTYNPTKIPTSETDQSLENTMKVCFTMRQY
RHSIRDLSAKINYTITLDAKRQKYRANFSPKTRILSNVVNIDLKAETCRSHRFFIDAFSE
DALNPLSNQLTFTFEGLPLARLQNIKPVLLPTIKTTTDHSLDFEINCGHDDICIDDLRMD
FNFSGFTNIEVGIMQELNVTVFVENRGENSYNTLFTLSYPFGLSYRRFTSKQGRVECVSL
DAERGVTLGETSCQISKPILKGNTQAVFHITYSIDKESTFDQSVTFTAKINSGNDQHSKT
SQFLKRKSIGVKFAIYIALIRHEDSSLHINFTAQKPDLERPVKQILKVENDFRELNFKVF
IKVPVILGDKFIWTDKNLQIPDCVKQRDERPLFTNFVEVFKKDRVLNCSVAVCAVFSCDV
TLIKNERKLYNIFGNVSSGWIEQTGLKAAVFELVSSASLDYDKSKYIFFSSDSQHTAPSV
QINTQVEVFEEVNLTKEIIGGVIGGLLLLALITAALYKAGFFKSQYKQMIENAEQSAEEG
PTTEK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacttctgtatcagattatgcatcttatgtgcatctcagtcagtgatggct
tttaacattgaccctgtttcctggaaaaccttcactgcaccttcaccttcacagagccaa
aatgttgcctttggctataaggtgatacagaaagatgcatcaagtctacttgtgagtgat
cctttaatacaacaccatcaaactcaaagaggacaaatatatcgttgtgctgtcactgaa
ggaaactgcactccactgtccattaccgtcaccaatgaggctgtcaacatgtcccttgga
ctttcaatgtctctagatcctcagtcttcaacagcagtggtttgtggtccaaccattcct
aagacctgtgatgtaacaaccacttacaatggcatgtgctttaaaatcagtccagataat
gttgtgagcagatctgtgccagagactctgagagaatgcccatcatcacaaattgatatt
gcttttttaatggatggatctggaagtgtgaattatccggattttattaagatgaaagca
tttgttatagaaatgatcaaaagttttgtataccgtgatacacagtttgccattgcacag
ttttctacagaatgtgtcattcattacaagtttcaacaagtccaaaacgccatggcatgg
gaagatgcagtgaataagatatctcaacagagaggatggacttacaccgcaaaagctata
agacatcttgtggatgagctattcgtaagtagtggaggtgtaagaccatcagccactaaa
attttggttgttatcacggatggtgaatcaactgattcaaagttgttgactgaagctgtt
caacacgcacaagctaaacatataacacgatatgctattggggttggcgatgcatttgat
aatgacgaagcaataagggagctggcaattattgcatctttacccaccaataggcatgtg
ttcaaagtaaccaattttgacgctctggaaagtattcgtgaaaaactcaaagagaacatt
atagccattgaaggaacccagacctctggagattcatctcgaatggagtttgcacaggac
gggtttagtgcagcatttacatcaaatacagatatgataatgaccgcagtgggagctttc
cagtggaagggtggatatcagctgtacaaaaatgatatttcagatcagtctttcaagcct
aattcagtctttcaagctggaagtgagcatgacagttatttaggttattccttgacaata
gcaacaatgtccagagcaaagtatgcagtcatgggagcaccaagacacaagcataaggga
caagtaactgtttcaagaattgatcgaagtgatttaaagcaactggattctcctaagcct
cagattggctcatattttggagctgaggtgtgtgtggtggacttgaacagtgactcctat
acagacctacttttggtatcggcaccaacgtacacagagtctgaccgagagggcttagtg
tttgtttacatcatcacgcgtcgggcaaacttcattttttcggatacactggtgggcatg
gcaggtcagaggggtcggtttggctcttctctggccagtccagcagatctgaatggtgat
ggtttcagggatgtgctggttggggctcctttagaggaggatggactgggcagcatctat
atcttcaatgggatagatggaggggtcatttccaaatactcacagaggattgctggatca
tctgtgcaaccaggtttgcggttctttgggatttcattgagtcagtcttctctagaccag
actcgagacagacttcctgacattgctgttgggtccaagggagcagttctgcttctcagg
tccagacccatcatgctcttggaaaccaaagtaacttacaacccaaccaaaataccaacc
agtgaaacagaccagtcactggaaaacaccatgaaagtgtgtttcaccatgcgtcaatac
agacacagcataagagacctatccgcaaaaattaattacaccataacgctggatgccaaa
cgacagaaatatcgagcaaacttctcacccaaaacccggatcctcagtaatgtggtgaac
atagatttgaaagcagaaacttgcagaagtcatcgtttctttatagatgctttctcagaa
gatgctctgaatccgttgtccaatcagttaacattcacatttgagggtctgccacttgcc
agactgcaaaacataaagccagtactgctgccaacgataaagaccaccacagaccacagt
ctggattttgagatcaactgtggacatgatgatatttgtattgatgacctcaggatggat
ttcaatttctctggatttacgaacatagaggtcgggataatgcaggagctcaacgtgacc
gtgtttgtagagaacagaggagaaaactcatacaacactctcttcaccctcagctacccc
tttggactttcctacaggagattcacatctaaacagggcagagtggagtgtgtgtctctg
gatgctgagcgaggagttacactgggagaaacctcctgccagatcagtaaacccatcctc
aagggaaacactcaggctgtgtttcatattacatacagcatcgataaagaaagcaccttt
gatcaaagtgtgacattcaccgctaagatcaacagtgggaatgaccaacactctaaaacc
agtcaattcctcaaacggaaaagcattggtgtcaaatttgccatttacattgctttaata
agacatgaagattcaagcctccacattaattttactgcacagaaacctgatcttgaaaga
ccagtcaaacagatactgaaggttgaaaatgactttagagaattgaatttcaaagtgttc
atcaaagtaccagtgattttgggagacaaattcatctggactgacaaaaacctacagatt
ccagactgtgtgaaacagagggatgaacggccgctttttaccaattttgtggaagtattt
aaaaaggatcgtgtgttgaactgctctgtggcggtgtgcgccgtgttcagctgtgacgtc
actctcataaagaatgaaaggaaactgtataatatatttggcaatgtgagctctggatgg
attgagcagactggactcaaggctgctgtttttgagttggtcagttcagcgtctctggat
tatgacaagagcaaatacattttcttttcctctgattctcaacacactgcaccgtctgtc
cagattaacactcaagtggaggtgtttgaggaggtgaacctgaccaaagagatcattgga
ggagtaataggaggactgctgctactggctctcatcacagcggctctctataaggctgga
ttctttaaaagccagtacaagcagatgatagaaaatgcagaacaaagtgctgaagagggg
ccaaccactgaaaaatga
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integrated database retrieval system
