Rhinichthys klamathensis goyatoka (western speckled dace): 130080610
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Entry
130080610 CDS
T09701
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04514
Cell adhesion molecules
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130080610
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130080610
09142 Cell motility
04810 Regulation of actin cytoskeleton
130080610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130080610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130080610
04515 Cell adhesion molecules [BR:
rkg04515
]
130080610
04090 CD molecules [BR:
rkg04090
]
130080610
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130080610
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130080610
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130080610
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin alpha subunits
130080610
CD molecules [BR:
rkg04090
]
Proteins
130080610
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
130080610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
130080610
NCBI-ProteinID:
XP_056102018
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MDQNFCIRLCILCASQSSVMAFNIDPVSWKTFTAPSPSQSQNVAFGYKVIQKDASSLLVS
DPLIQHHQTQRGQIYRCAVTEGNCTPLSITVTNEAVNMSLGLSMSLDPQSSTAVVCGPTI
PKTCDVTTTYNGMCFKISPDNVVSRSVPETLRECPPSQIDIAFLMDGSGSVNSLNFIKMK
AFVIEMIKSFVDRDTQFAIAQFSTECVIHYKFQVQNAMAWEDAVNGISKQRGRTSTAKAI
RHLVDKLFVSSGGVRPSASKILVVITDGKSTDSKLLTEAVQHAQAKHITRYAIGVGNAFT
NDKATKELAIIASLPTNRHVFKVTNFDALESIREKLKENIIAIEGTQTSGDSSRMEFAQD
GFSAAFTSNTDMIMTAVGAFQWKGGYQLYKTNDISDQSFKPNSVFQAGSEHDSYLGYSLT
IATMSRAKYAVMGAPRHKHKGQVTVSRIDRSDLKQLDPPKPQIGSYFGAEVCVVDLNSDS
YTDLLLVSAPTYTESDREGLVFVYIITRQAKFIFSDTLVGMAGQRGRFGSSLASPADLNG
DGFMDVLVGAPLEEDGQGSIYIFNGGIDKINPKYSQRIAGSSVRPGLRFFGISLSQSSLD
QTRDSLSDIAVGSKGAVLLLRSRPIMLLETKVTYNPTKIPTVDQTDCTKPLQNDLTVCFI
MSGYKHRIPGLASNISYTIMLDSKRHKYRAYFPDKKTLLSDVMNVELKEVCKPHPFFIEA
CSEDALNPLANQITFTFEGLPSGSMGNLRPVLLPETKITTDHNLDFEIDCGTDNVCVDDL
RMDFNFSGSTNIEVGIMQELNVTVFVENRGENSYNTLFTLSYPFGLSYRRFTSKQGRVEC
VSLDAERGVTLGETSCQISKPILKGNTQVVFDITYSINKESTLGQNVRFTAAVTSGNDKH
SSDSEFNKQKTIDVKYAIYIALIRHENSTIHINFTSGKRDLMKPVQQILKVQNDLRELAF
KVFIRVPVKFGDTDIWTNSNLQIPGCNSENMTKPVITNFALLEVIKNYRLVNCSVAVCAV
FSCDITLIKNERKLYNIFGNVSSGWIEQTGLKAAVFELVSSASLDYDKSKYIFFSSDSQH
TAPSVQINTQVEVFEEVNLTKETTGGVIGGLLLLALITAALYKAGFFKSQYKQLLQEAQG
DAGGQPNMAQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacttctgtatcagattatgcatcttatgtgcatctcagtcgtcagtgatg
gctttcaacattgaccctgtttcctggaaaaccttcactgcaccttcaccttcacagagc
caaaatgttgcctttggctataaggtgatacagaaagacgcatcaagtctacttgtgagt
gatcctttaatacaacaccatcaaactcaaagaggacaaatatatcgttgtgctgtcact
gaaggaaactgcactccactgtccattaccgtcaccaatgaggctgtcaacatgtccctt
ggactttcaatgtctctagatcctcagtcttcaacagcagtggtttgtggtccaaccatt
cctaagacctgtgatgtaacaaccacttacaatggcatgtgctttaaaatcagtccagat
aatgttgtgagcagatctgtgccagagactctgagagaatgcccaccatcacaaattgat
attgcttttttaatggatggatctggaagtgtaaattctctgaattttattaagatgaaa
gcatttgttatagaaatgatcaaaagttttgtagaccgtgatacacagtttgccattgca
cagttttctacagaatgtgtcattcattacaagtttcaagtccaaaacgccatggcatgg
gaagatgcagtgaatgggatatctaaacagagaggaaggacttccaccgcaaaagctata
agacatcttgtggataaactattcgtgagtagtggaggtgtaagaccatcagccagtaaa
attttggttgttatcacagatggtaaatcaactgattcaaagttgttgactgaagctgtt
caacacgcacaagctaaacatataacacgatatgctattggggttggcaatgcttttact
aatgacaaagcaacaaaagagctggcaattattgcatctttacccaccaataggcatgtg
ttcaaagtaaccaattttgacgctctggaaagtattcgtgaaaaactcaaagagaacatt
atagccattgaaggaacccagacctctggagattcatctcgaatggagtttgcacaggac
gggtttagtgcagcatttacatcaaatacagatatgataatgaccgcagtgggagctttc
cagtggaagggtggatatcagctgtacaaaacaaatgatatttcagatcagtctttcaag
cctaattcagtctttcaagctggaagtgagcatgacagttatttaggttattccttgaca
atagcaacaatgtccagagcaaagtatgcagtcatgggagcaccaagacacaagcataag
ggacaagtaactgtttcaagaattgatcgaagtgatttaaagcaactggatcctcctaag
cctcagattggctcatatttcggagctgaggtgtgtgtggtggatttgaacagtgactcc
tatacagacctacttttggtatcggcaccaacgtacacagagtctgaccgagagggctta
gtgtttgtttacatcatcacgcgtcaggcaaaattcattttttcggatacactggtgggc
atggcaggtcagaggggtcggtttggctcttctctggccagtccagcagatctgaatggt
gatggtttcatggatgtgctggttggggctcctttagaggaggatggacagggcagcatc
tacatcttcaatggcggaatagataaaataaatcccaaatactcacagaggattgctgga
tcatctgtgcgaccaggtttgcggttctttgggatttcattgagtcagtcttctctagac
cagactcgagacagcctttctgacattgctgttgggtccaagggagcagttctgcttctc
aggtccagacccatcatgctcttggaaaccaaagtaacttacaacccaaccaaaatacca
accgttgaccaaaccgactgcacaaagccactgcaaaacgacctgactgtgtgcttcatc
atgagcggatacaaacatcgcataccaggtttggcttcaaatatcagttacaccataatg
ctggattccaagcgacataaatatcgtgcatacttcccagacaaaaaaacgctcctcagt
gatgtgatgaacgttgagttaaaggaagtatgcaaacctcatcctttttttattgaggct
tgttcagaagatgctctgaatccgttggccaatcagataacattcacatttgagggtctt
ccatcaggaagtatgggaaatttgagaccagtactgctgccagagacaaagatcaccaca
gaccacaatctggattttgagatagattgtggaactgataatgtatgtgtcgatgacctt
agaatggatttcaatttctctggatctacgaacatagaggttggaataatgcaggagctc
aacgtgaccgtgtttgtagagaacagaggagaaaactcatacaacactctcttcaccctc
agctacccctttggactttcctacaggagattcacatctaaacagggcagagtggagtgt
gtgtctctggatgctgagcgaggagttacactgggagaaacctcctgccagatcagtaaa
cccatcctcaagggaaacactcaggttgtgtttgatattacatacagtattaataaagaa
agtacactgggccaaaatgtgaggtttactgctgcagtcacgagtgggaatgacaaacac
tcaagcgacagtgagtttaacaaacagaaaaccattgatgtcaaatatgccatctatatt
gccttgataaggcatgaaaattccaccatccacattaattttacttcagggaaaagggat
cttatgaaaccggtccagcagatattaaaggttcagaatgacctcagagaattagctttc
aaagttttcatcagagtaccagtgaaatttggtgatactgacatctggactaattcaaat
ttgcaaatacctggctgtaacagtgagaacatgacgaagcctgttatcaccaattttgca
ttgttggaagttattaaaaattatcgtctggtgaactgctctgtggcggtgtgtgccgtg
ttcagctgtgacatcactctcataaagaatgaaaggaaactgtataatatatttggcaat
gtgagctctggatggattgagcagactggactcaaggctgctgtttttgagttggtcagt
tcagcgtctctggattatgacaagagcaaatacattttcttttcctctgattctcaacac
actgcaccgtctgtccagattaacactcaagtggaggtgtttgaggaggtgaacctgacc
aaagagaccactggaggagtaataggaggactgttgctactggctctcatcacagcggct
ctctataaagctgggttcttcaaaagccagtacaagcagttgctgcaggaggcgcagggc
gatgcaggaggacagccaaacatggcacaataa
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integrated database retrieval system
