Rhinichthys klamathensis goyatoka (western speckled dace): 130080637
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Entry
130080637 CDS
T09701
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130080637 (mms19)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130080637 (mms19)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130080637 (mms19)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130080637 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
HEAT_ECM29
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
130080637
NCBI-ProteinID:
XP_056102056
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MAADNSLLLGLVEEFVSGQVDSKATETASGVKTGQFTILQLVEALGLSLTSSQPHTRGRG
VQLLSQVLQECYSCLSEREVEVLIAFYENRLKDHYVITPHVLQGLKALTKCSVLPPGSAV
SILRSIFQDVHVQSLMLAERSCVYNILISLMESREEELKGLGADFTFGFVQSVDGERDPR
NLLLAFQVARNIIHRGYDLGKFVEELFEVTSCYFPIDFSPPPNDPHGITQEDLILSLRNV
LTGTSRFAEFLLPLIIEKLDSDVQSAKVDSLLTLAACGLTYSHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALGALTSSLSRSVLSSDSEDSLQVFLNLVLKDCQHHLCEPDLKLV
WPSTKLLQAAAGASYRASLIVSATVIPALLEQYNNRTQCAQRRTLLEVLQGFVQPTPLSR
PADGVESVLVAFQQSLCSVVFSALAESSAGLQVTATRVLTALGQQPCLLAQADVEKAVDH
LTRLILEEEDTQVSSAVVECSGSLAHLHPKAFISRMIPRLKEEILSGETQCTRAHTHHTH
CSLTDNLGLLSSTESNAAVRLRCVTAVASVSSQLSVVQESTPVLLQVLASAHTGSCSFSV
EEVSAVCISLQRIAAHARDTEEIGRFFHSNIIPRLLGLALQAALQSRDSGHSSPLTDEAV
LSALVPVISTACAALQSESASRMAAQAVSLFLDGDVSFLPENAFPSQIQLLQSQAECRGP
SQLVCLLMACVCSLPRSVDVPEIDRLLVQLEDLICTCSHLFCYTFAAKCFAGLVNKRPAG
EALDAVLERVLKRINVELENGSSSQRTQAFTLLLWVAKALLLRYHPLSTALTDKLFALLS
DPELGSQAADGFCVLMSDSPDVLNRSCHADVRIMYRQRFFAENSSKLVEGFNSAEQEKKS
CYLKALSHIVNNLPREVQLTELPALLPLLLEALSCPDREVQFSTLSCMQPVLLEPPEALR
NQLEALFSRMLALTTSPDMKVRIASIRCVHALSRLPEHVILPFRARVLKALAVCLDDRKR
LVRNEAVAARGQWFLLGSPGGK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggataacagtttgctcctgggtttagtggaagaattcgtgtctggacaggtt
gatagcaaggctacagaaaccgcttcaggtgtcaagactggacaattcacaattctccag
ctggttgaagcattggggttgagtctgactagctctcagcctcatacgcgtggcagagga
gttcagctcctgtctcaagtcctgcaggaatgctacagctgcctatctgagagggaggtg
gaggtcctgatagctttctatgaaaacagactgaaggatcactatgtgatcactccacat
gttctccagggactcaaggctttgacgaaatgctcagttctgcctcctggttcagctgtg
tccattttgagatccatctttcaggatgttcatgttcagtccttgatgctggcggagcga
tcatgtgtttacaacatcctcatcagccttatggagtccagagaggaagagctcaaaggt
ttgggtgcagactttacatttggatttgtgcagtcagtagatggagaacgagatcctcgt
aacctcctgctggcgttccaggtggccaggaacatcattcacaggggatacgatctcggt
aaatttgtagaggaactctttgaagtgacgtcctgttattttcccatagactttagccct
ccacccaatgatcctcatgggatcacacaggaagatcttattctttctctacgaaatgtt
cttactgggacgtctcggtttgctgagtttctgttaccattgatcattgagaagctggac
tcagatgttcagagtgccaaagtggactccctgctgacactggccgcctgtggtctgaca
tacagccataaagagctggcagaattcctcccgggcctttggagctcgatacggagagag
gtgttccagacggccagtgagagggtggaatcagccggtctgtcggctctcggggcgctg
acgtccagtctgtcccgttctgtgctcagttcagactctgaggattccctgcaggtgttt
ctaaacctcgtcctcaaagactgtcagcaccatctctgcgagccagacctgaagctggtg
tggcccagtaccaaactcctgcaggccgccgccggagcctcatacagagcgagtctgata
gtgtcggctacggtcataccggccctcctggagcagtataataacaggacacagtgtgct
cagcggcgcaccctgctggaggttctgcagggtttcgttcagcccaccccgctcagccgg
cctgcagatggagtggagagtgtgttggttgcgtttcagcagtctttgtgcagcgtggtg
ttttctgcgctggcggagtctagtgctggtctacaggttacagccacacgtgtgcttact
gcactgggacagcagccctgcttgttggctcaggcagatgttgagaaagctgttgatcat
ttgaccagactcattctggaggaagaagatactcaagtgagttcggctgtagtggagtgt
tcaggctctctggctcatctgcatcccaaagccttcatctccaggatgattcctcgactc
aaggaagagatcttatcaggtgagacccagtgcacgcgcgcgcacacacaccacacacac
tgcagtttaacagataatctgggactactttcctctacagagtctaacgcagctgtccgc
ctgcggtgtgtgacggcggtagcgtctgtgtcgtctcagctcagtgttgtgcaggaaagc
acccccgtcctgctacaggtgctggcttcagcacacacaggtagctgcagtttctccgtg
gaggaagtgagcgctgtatgcatcagtttgcagcggatagcagcgcacgcacgcgacact
gaggagatcggacgattctttcatagcaacatcattccacgacttctaggactggcctta
caggcagcgctgcagagtagagactcaggtcacagtagtccactcacagatgaagccgtt
ctttctgctttagttccggtcatcagcacagcctgtgctgcgttacaatcagaatcagcg
tcccgcatggcggcccaggctgtttctctgttcctggatggagatgtgtcctttctgcca
gagaatgccttcccttcccaaatccagttgctccagagccaggcagagtgtcgaggtccg
tctcagttggtgtgtctgctgatggcctgtgtttgctctcttccacgcagcgtggatgtc
cctgagatcgacaggcttctggtccagttggaagatctgatctgtacgtgttcacacctg
ttctgctacacgtttgcagcgaaatgcttcgctggattggtcaacaagaggccggcaggt
gaagctcttgacgcagtgctggagagagtgttgaagaggatcaatgtagagctggagaac
ggttcctcttcccagcgaacacaagccttcacactgcttctctgggtggccaaagctctc
ctgttacggtaccatccgctatcaacagccctcactgacaagctctttgctctgttgagt
gacccggagttaggatctcaggcggccgatggcttctgcgtcctcatgagcgactcgcca
gatgtgctcaaccgcagctgccacgccgacgtgcgcatcatgtacagacaacgctttttt
gctgaaaactcaagcaaacttgttgaaggcttcaactcagcagagcaggagaagaagtct
tgttatttgaaagccctgtcacacatcgtgaacaaccttccccgagaggtgcagctcaca
gagcttcctgcgctgctgccgctcctgctggaagcgctgtcgtgtcccgatcgagaggtc
cagttctccaccctgtcctgcatgcagccggtgctgctggagcccccggaggccctccgg
aaccagctggaggcgctgttctcacgcatgctggccctcaccaccagccctgacatgaaa
gtgagaattgcatctatccgctgcgttcatgctctctctcgcctgcctgaacatgtgatc
ctgccgttccgtgccagagtgctgaaagctctcgctgtgtgtctggatgacagaaagagg
ctggtgaggaacgaggctgtggcggctcgagggcaatggtttttgttaggaagccccggg
ggaaaataa
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integrated database retrieval system
