Rhinichthys klamathensis goyatoka (western speckled dace): 130081149
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Entry
130081149 CDS
T09701
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130081149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130081149
03009 Ribosome biogenesis [BR:
rkg03009
]
130081149
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130081149
Spliceosome [BR:
rkg03041
]
Complex A
U1 snRNP components
U1 related factors
130081149
Complex B
130081149
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
Pre-60S particles
Helicases
130081149
BRITE hierarchy
Motif
Pfam:
Helicase_C
Helicase_C_2
ERCC3_RAD25_C
DNA_circ_N
Motif
Other DBs
NCBI-GeneID:
130081149
NCBI-ProteinID:
XP_056102084
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MKSAARRLFAGGISQEMGVTYSAANVSSPPAGRTYSRQFGAGGKKKPLLRLLEEIMSEKE
NKTIIFVETKRRCDELTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKACILIATDVA
SRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQANDLISVLR
EANQAINPKLIQMAEDRGGRSRGGRSGYKDDRRDRYSSGGRRDFSSYRDRDCDRGYGSGP
KVQNGGYGGSSYDKSNNSSSSYGNCYGGNGQTSYNTANSVAAFGNQTFQNQSFPGNLAQA
QNGINHPQYPFNPPQPHQQPPQPMVPFPMPPSFPQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggcggcccggcggctgttcgccggcggcatctcgcaagaaatgggagtgacg
tattcggcggcaaacgtttcatctccgccagcggggcgcacctatagccgacagtttggg
gccggcggcaaaaagaagccacttctgcggctattggaggagataatgagtgagaaggag
aataagacaatcatttttgtggagacaaagaggagatgtgatgagttgaccaggaggatg
aggagagatggctggcctgccatggggattcatggagacaagaatcagcaggaaagagac
tgggttctgaatgagtttaagtacgggaaggcctgcatcctgattgcaacagatgtagcc
tcacgtggattagatgtggaagatgtcaaatttgtcatcaattatgactaccctaactca
tctgaagactatattcatcgcattggaagaacagcccgcagtcaaaaaacaggcacagcc
tacaccttctttactcccaacaacatgaaacaggccaacgacctaatctctgtcctccga
gaggcaaaccaggccatcaacccaaaactgatccagatggcagaggacagaggaggtcga
tctcgtggtggtcgcagtggctataaggacgatcgtcgagataggtattctagtgggggt
aggagagatttcagtagttacagagatagggattgtgacaggggttatggtagtggacca
aaggtgcagaatggtggctatggaggcagcagctatgacaaaagtaacaatagcagcagt
agctatggtaattgctatggtggcaatggccagaccagctacaacacagcgaactcagtt
gctgcctttgggaatcaaactttccagaaccagtcattcccgggtaatctggctcaggcc
cagaatgggataaaccacccacagtacccatttaatcctcctcaaccgcaccagcagcca
ccacagcccatggttccattccccatgcccccttccttcccccagtag
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