KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130081228
Entry
130081228         CDS       T09701                                 
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
  KO
K24728  cilia- and flagella-associated protein 52
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rkg03037]
    130081228 (cfap52)
Cilium and associated proteins [BR:rkg03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   130081228 (cfap52)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_RIG_1st KNTC1_N WDR54 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 130081228
NCBI-ProteinID: XP_056102185
LinkDB
Position
Unknown
AA seq 617 aa
MAEDTQEFPQLALEAVIGFNGHVFSGLKVHPDREHIIYSLGCTVIIKSLRGGKQDFLHGH
TNNVSCISVSKSGRYIASGQVTFMGFKADVIIWDYEKKEMYARLVLHKAKVEDLSFSPND
KYLVSLGGQDDASIVVWNIESKKAICGSPASAQSAGHCFAIEFTNLNDEIFVSAGSGTLR
VWELDLPNRKIRPTECQTGQLKRIVKCLEIPNDDNYFYCGTTSGDILKVNLKTRLLNSCG
PVKEKFSKGVNTLKVLKTGDILVGSGDGMLTLCSGGNFKTIKSVQLEGGVTSVALRGDGH
QFFVGTETAQIYSLSYADFKPELIATNHNSSVKDVAFPFGTSELFATCSQNDIRVWHAES
SKELLRIIVPNITCNALGFMQDGRSIFSAWNDGKIRVFTPETGKLRLIIHNAHSMGVTAI
ASTNDCKWIVSGGGEGQVRVWEISQKSYRLIETMKEHKATVNCIKIKSNDKECVTASSDG
ACIIWDLVRFVRNQMVLSNTLFSVVCYHPEEYQIITSGTDRKIGYWEVYDGSAIRELEGS
LSGAINGMHISEEGKYFVTGGDDKLLKLWLYSDGEVTHVGIGHSGSITNVRICPNSRYIV
STSADGAILRWRYPQLS
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggcagaagacacgcaagaattccctcagctcgcattagaggctgttattggttttaat
gggcatgtgttttctggactcaaagtgcatccagacagagaacatataatttattctctt
ggctgcactgttattattaagagtctgagaggtggaaaacaggatttccttcatggccac
acaaacaacgtctcttgcatttctgtgtctaaaagtgggcgctatattgcatctggacag
gtcactttcatgggctttaaggctgatgttattatctgggactatgagaagaaggagatg
tatgctcgtcttgtgctccataaagctaaagttgaagatcttagcttctcccctaatgac
aagtatctggtatctctaggtggacaggatgatgccagtatcgtggtgtggaacatcgag
agtaagaaggctatatgtggcagtcctgcttcagcacagagtgctggtcactgcttcgcc
atagagttcaccaacctgaacgatgaaatctttgtctctgctggaagtggaactctacgt
gtgtgggagctggatttacccaacagaaagatccggcccacagaatgtcagactggacag
cttaagagaattgtcaaatgccttgagatcccaaatgatgataattatttctactgtgga
actacaagtggggatattctgaaagtgaacctgaagactaggttgctcaacagctgtgga
cctgttaaagaaaagttcagcaagggagtgaacactcttaaagtcttgaagaccggtgat
attttagttggatcaggagatgggatgttgactttgtgctcaggagggaatttcaaaacc
ataaagagtgttcagttggagggtggggtgacatcggtggccctgcgtggagacgggcat
cagttcttcgtcgggacagagacagcacagatctacagtttaagctacgctgacttcaaa
ccagagctcattgctacaaatcataacagttctgtaaaggatgtggcctttccttttggg
acgtcagagctctttgcaacctgttcacagaatgatataagagtgtggcatgctgagtcc
tccaaggaactactgcgtatcatagtgcccaacataacgtgcaacgctctgggctttatg
caagatggccggagcatcttcagtgcttggaacgatgggaagattcgtgtgttcactcca
gagaccgggaagctgaggctgataattcataatgcccacagtatgggagtaactgccata
gcatcaaccaatgactgcaagtggattgtcagtggagggggagaaggacaggtgcgagtc
tgggagatatcccagaaatcctatcgactcattgagaccatgaaggagcacaaagccaca
gttaactgtattaagatcaagagtaatgacaaggaatgtgtgacggccagctctgatgga
gcctgcatcatctgggacctggtgaggttcgtcaggaatcaaatggtcttgtccaacacc
ctgttcagtgttgtatgttaccaccctgaggaataccagatcatcaccagtggcactgac
agaaagattggctactgggaggtgtatgatggttctgcaatccgagaacttgagggctcc
ttgtccggagctataaatggcatgcacatttctgaggagggaaaatattttgtgactggt
ggagatgacaaactactgaagctctggctctattctgatggcgaagtgacccacgttggc
atcgggcacagtggaagcatcacaaatgtgaggatctgtcccaacagcagatatatcgtc
agcaccagtgccgatggagctatcctaaggtggagatacccacaactctcatag

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