Rhinichthys klamathensis goyatoka (western speckled dace): 130081290
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Entry
130081290 CDS
T09701
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130081290 (sned1)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
130081290 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
130081290
NCBI-ProteinID:
XP_056102282
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MGWLRRPVLSMCLLLILLHGMEAAVPLEEFYPFGLDEGDSQTIEQDDGGSGLIAISVAFP
FFGERHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGKVFYRDS
KDPAILRRATADTNHYFPEFPMFVTTWVLIATWHQVTFFGGTSITPVNTFQVVLITDGEL
SFTIFQYHNITWTTGMHATSGGDLAGLGGIAAQAGFNAGDGRRYFNIPGSRTDDIVEVET
TTNVGYPGRWVFRIDDSQVQVGSCNDSALVCANLRPCQNGGRCIDDCITGNPSFTCSCLA
GFTGRTCQIEVDECSSYPCQNGGTCMDKINHFICLCPQGFIGTTCEMDVDECQETLCLNG
AQCIDGVGNFTCVCQAGYTGFLCESDINECASMPCLNEGACEDLLNNYTCTCTANFTGSH
CETELVVMENSSTTDAANQTVPCDGESCEKRQICEYIGSGNYNCTCIPGYYGDDCEEECP
CQNGGVCVDVNGTCECPTGFTGLYCQFEVTQTPCSNNRPCPDGGPCLEYGGTYLCTCQTG
VDFDHKDFYPYVQPRSACDSSPCQNGGYCYERDGGYICECKHGYRGQHCEIVRLSTCASG
PCRNGGSCKEEADSYRCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCECSP
SFIGRHCEINKGSNPALEAGLDCGPPVKVKHAEVQYSSTTPGSMALYACHPGYTPLPRAT
QSICSSQGSWSQPPVCEEINECLSQPCMNGGTCRDRVTSYLCECEDGFTGQRCQTDIDEC
LSEPCKHGGTCEDQPGSYFCHCQQGYAGQDCEIEQDGCEPNPCLNGGVCRGYRRNHLCVC
KEGYVGDRCQTLENPCVLQPCGNRGVCWSDRRGNYSCACRVGHTGRDCERDLLPPSGLHV
LRVEENEVELRWDHSDATQNLISGFAVAFAPIGRGPRKTDFLEKQHSTYVLQGLNPGQLY
NISTFSVKRNTNSNDISQPAFALIRTRPRRVEQLEIVNVSSSQVWLRWLVHVGRHAAISQ
VRVSLVPADGSGPRTAVLNSSVTEYTFSTLLPGQMYTVDVVTQSGLRPEDLPSTSKSAGP
LHFWTRPLPPQNLTLSHFTTTSARVTWDHHPRSLPDGFVVNITRGLSTRSRYLPDGSLGT
YTIRDLIPGQHYRLALTAVRKTGQDNIQSVSQHIAFATLPILKDQSRGDRPQGGQDQQMG
QTLTQVQDGGTDEQTELLEEPLRYTELIDGRGRITAKFTKLPHKTIRHRTKPDAPIKLEK
MEETTNKISLALEIPQEAPKSKSESSQDCRTQPCQNGGTCAQINESFSCNCATGFKGRRC
ELYCQRVPHPCTRLYSETKSVPVWEEGVCHYLYKRTYKVQQDVCFKEICEPLLPKKTPNR
RTQKQQ
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggggtggctgaggagaccagtgctctccatgtgtttgcttcttattttgcttcatggc
atggaggctgctgtacctctggaggagttctacccttttgggctggatgaaggggactcc
cagaccatcgagcaagatgatgggggatcaggactgatagcaatatccgtggctttccct
ttcttcggagaacggcacaccggactctatgtcaacaacaatggcctggtgtcattcctg
agggaggtctcccagttcacccctgtggcattccctattgctggagaccgcagggtggtg
gctccgttctgggcagatgtagacaaccggagggcaggaaaagtcttttatcgagacagc
aaagatcctgctatcctgagaagagccactgcagacactaatcattacttccctgagttc
cctatgtttgtcaccacatgggttctgattgctacctggcatcaagtcacgttttttggt
ggcacctcaattactccggtcaatacatttcaagtagttcttatcacagatggtgagctc
tccttcaccatcttccagtaccacaatattacctggacaacagggatgcatgctactagt
ggtggtgatctagcaggcttggggggcatagctgcacaggcaggttttaatgctggcgat
gggaggcgctatttcaatatcccaggctctcggacagatgatattgtagaagttgaaacc
accacgaatgtgggctatcctggtcgttgggtctttcgtattgatgattctcaggtgcaa
gtgggtagctgcaatgactcagctttggtctgtgctaacttaaggccctgtcaaaatggt
ggccgttgcattgacgactgcatcacaggaaatccctccttcacttgctcgtgtttagct
ggcttcactggacgcacgtgccagatagaggttgatgagtgctcctcatacccctgtcag
aatggaggcacatgtatggacaaaatcaaccacttcatctgcctgtgtccacagggattc
atagggacaacatgtgagatggacgtagatgagtgccaagagaccctatgcctcaatgga
gcacagtgcatagatggtgtcggcaacttcacctgcgtatgccaagcaggttatactggg
ttcctatgtgagtcagacatcaatgaatgtgcatccatgccatgtttgaatgaaggtgcg
tgtgaagacctgctgaataactacacctgcacctgtacggcaaacttcactggaagccac
tgtgagacagagttagttgtcatggaaaattcctctacgaccgatgctgcaaatcagaca
gttccctgtgatggagagagttgtgaaaaacgtcaaatctgcgagtacattggctctgga
aactacaactgcacgtgcatccccggttactatggtgacgattgtgaagaggagtgtccc
tgtcagaacggaggagtttgtgttgatgtgaatggcacctgtgaatgtccaacaggcttc
actggactctactgtcagtttgaggtaacacaaacaccctgtagtaacaacagaccatgt
ccggatggaggcccatgcttggagtatggcggcacgtacctctgcacctgccaaaccggt
gtcgacttcgatcacaaggacttctacccatatgtacagccccgatcggcctgcgattct
tcaccgtgtcagaatggggggtattgctatgagagagatggaggctacatctgtgagtgc
aagcatggctacagaggccagcattgtgaaatagtcagattaagtacctgtgcctctggt
ccctgtcgtaatggaggctcttgtaaagaagaagctgacagctaccggtgtgtctgtccc
taccgtttcacagggaaacactgtgaagtgggaaagccggatccttgtgcttccagtccc
tgtctgaacggggggacatgtttccactacattggtaaatacaaatgtgagtgctcccca
tccttcataggaagacactgcgagatcaacaaaggatccaatccagctttggaggcaggt
ctggactgtggcccccctgtgaaagtcaagcatgcagaggtgcagtattcctccactacc
ccaggctccatggccctgtatgcatgccacccaggctacactccccttcccagggccacc
cagagcatctgcagcagccaggggtcctggagccagcctccagtctgtgaagagataaac
gagtgtttgtctcagccgtgtatgaatgggggaacttgccgcgatagggtaacctcgtac
ctgtgtgaatgtgaagacggttttactggccagcgctgtcaaacagatattgatgaatgc
ctttctgagccatgtaagcacggaggtacttgtgaggatcagcctggctcttacttctgc
cactgccagcagggctatgctggacaggactgtgagatagaacaggatggatgtgagcca
aatccctgcttgaatggaggtgtatgccgaggctacaggaggaaccacctgtgtgtgtgt
aaagagggttatgttggagaccgctgccagacattggagaacccatgtgtactgcagccg
tgtgggaaccgaggtgtctgttggagtgataggagggggaactacagctgcgcctgcagg
gtgggccacacagggagagactgtgagagagacctgttgcctccatctggcctgcatgtg
ttgcgggtagaagaaaatgaagttgagttgcgctgggatcattcagatgccactcagaat
ttgatcagcggctttgctgttgcctttgctcctattggtcgtggaccaaggaagacagac
ttcctggagaagcagcattctacctatgtgctgcagggtctgaaccccggacagctttac
aacatctccaccttctctgtcaaacgcaacaccaacagcaatgacataagccagccagct
ttcgctctcatccgcactaggccacgtagggtggaacagctggagatagtgaatgtgtcg
tcttctcaggtatggctgcggtggctggtgcatgttggccgccatgctgcgatcagtcag
gttcgagtgtccctggtgcctgcagatggtagtggacctcgcacagccgtgctcaatagc
agcgtcacagagtacaccttcagcacattgctcccaggtcagatgtacacagtagacgta
gtcacacagagtggtttgcgccctgaagatctaccatcaaccagcaaatctgctggacca
ctgcacttctggaccaggccgcttccacctcagaatcttacactctcccatttcaccact
acctctgctcgggtcacatgggaccatcatcctcggagtcttccagacggttttgtagtt
aatattactcgaggcctgagcacccgtagccgctacctacctgatggaagtttggggacg
tacaccatacgagacctcattccaggccagcattaccgacttgccctcactgcagtacgc
aaaacgggccaggacaacattcagagcgtctctcaacacatagccttcgccacattacca
attctaaaggaccaaagcagaggtgacagacctcagggaggacaggaccagcagatggga
cagaccttgacacaagttcaagatggaggcacagatgagcaaacagaactccttgaagaa
ccactaagatatacagagcttattgatggaagagggagaattacagctaaatttaccaaa
cttccacataaaactatcagacatcgcacaaagcctgatgctccaatcaaattagaaaag
atggaagaaaccaccaataagatcagtctagctctggaaattcctcaagaagcgccaaag
agtaaatctgagtcatctcaagactgcagaactcagccctgccagaatggtggaacatgt
gcgcagatcaacgagtcgttcagctgcaactgtgccactggtttcaaaggcagacggtgt
gagctatattgtcagcgtgtgcctcacccatgtactcgcctttactctgaaacaaagagt
gtacctgtatgggaggagggtgtttgccattatttgtacaaaaggacatataaagttcag
caggatgtttgttttaaagagatctgtgagcctttgctgcctaagaaaactccaaacaga
agaactcaaaaacaacaataa
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