Rhinichthys klamathensis goyatoka (western speckled dace): 130081763
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Entry
130081763 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130081763
04121 Ubiquitin system [BR:
rkg04121
]
130081763
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130081763
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130081763
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
130081763
NCBI-ProteinID:
XP_056102446
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MASNAFNGPEIEDPPITNRSGVWVHFGFPVSYDGDGKRVVDKKTTVCRICYMTIGHTNGN
TSNMSTHLRRHHPSVSVSGTRRKQAETYMTQSIPAAFRQAFPTDSNRAKQITAAIGTFIA
ADMRPYSVVENAGFKNMLNVIEPRYTIPSRAHFSQTVIPDLYQKTKAQIENQLAKATAVA
LTTDGWTSRATQSYLTVTAHYITAEWELKSHVLQTRPLDSHTSEDLAKGITEAVEVWKLE
RANLTIPVTTDNARNIVNAVVGAAGLGPQIGCFAHVINLASQKAMAVQQISRLLAKIRKI
VTFFHRSTTAAHVLKTKQELLQLPVHKLIQDIPTRWNSSYDMIERYIEQQAAVYSAMTDK
AVKKNVKDIMTLSENDMRLAENVITVLKPLKTVTTLMCTESSPSASMVLPMKMMILKSME
LSDDDSPAVRDVKTAIKNDLQQRYTLPDLQDYLHKSTALDPRFKSLQHLDATTRLRVYEA
LTTEIVTEQATSTTEPATSIETVDLEPSTSPPREKKSAMTELFGGMFMTHHHDSSPKSVA
KLAEEEMKLYMVDSIPLDADPLKWWKNHEHLYPHFARLAQRYLAVPGTSVPSERYAAKKI
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccagtaatgcgtttaacggaccagaaatagaagatcctccaataaccaacagatct
ggtgtttgggtccactttggtttccctgtaagctatgatggtgatggcaagagagtggtg
gataaaaaaacaacggtatgtcgcatctgctacatgacaatagggcacaccaacgggaat
acttcaaacatgtcaactcatttacgacgacatcaccccagtgtgtcagtatccggaaca
agacgaaaacaagcagaaacatacatgacacaatctatccccgcagcatttagacaggca
tttccaactgattcaaacagggcaaaacagatcaccgcggcgattggtacatttatagcc
gcggatatgagaccttactctgtagtggaaaacgcaggttttaagaacatgcttaatgta
attgagccccgttacactattccctcgcgagcccatttcagccagactgtaattcctgat
ttgtaccaaaaaacaaaagcccaaatagaaaaccaattggccaaagcaacagccgttgct
ctgacaacagacggctggacgtcaagggctacacaaagctacctgactgtaacggcacat
tacattaccgctgaatgggaactgaaaagccacgttcttcagacacgcccccttgatagt
cacacgagtgaggatttggccaaagggataacagaagcagtggaagtgtggaagttggag
agagctaatctaactattcctgtgactactgacaatgccaggaatatagttaatgctgtt
gttggagctgctggacttgggccacaaatagggtgctttgcccatgtcattaatctagca
tctcagaaagcaatggcagtgcagcagatctctcgtctcctagcaaagatcagaaagatt
gtgaccttttttcacagaagcacaacagcagcccatgtgttgaagacaaaacaggagttg
ctgcagcttcctgttcacaaactcatccaagatataccaactagatggaattcaagctat
gatatgatagaaagatatattgaacagcaggctgcagtgtattctgcaatgacagacaaa
gctgtgaagaaaaatgttaaagacattatgactttgtctgaaaacgacatgcgactggct
gagaatgttatcacagttttgaaacccttgaaaactgtgacaacccttatgtgcaccgag
tcctctccatctgcgtccatggtccttcctatgaaaatgatgatcctgaaatccatggaa
ctgtctgatgatgacagcccagcagtgagggatgtcaaaacagccatcaaaaatgacctg
cagcagcgatacacgttacctgatcttcaagattacctacacaagagcacagctttagat
ccacgttttaaatcactgcaacacttggatgctaccactcgcctgagagtctatgaagct
ctaaccacagagattgtgactgagcaagctacgagcaccacagagccagcaacctccata
gagacagtggacttggagccctcaacatcacctccacgagaaaagaaatcagccatgact
gagctttttggaggaatgttcatgacccatcatcatgattcaagccccaaatctgtggcc
aaattggcagaggaggagatgaaattgtacatggtggactctattcccctggatgcagat
ccactaaaatggtggaaaaaccatgagcacttataccctcattttgccaggttggcacag
cgttacttggctgtgcctggaacctctgtccctagcgagaggtatgctgctaagaaaata
ccatag
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