Rhinichthys klamathensis goyatoka (western speckled dace): 130081813
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Entry
130081813 CDS
T09701
Symbol
fmodb
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130081813 (fmodb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rkg00535
]
130081813 (fmodb)
Proteoglycans [BR:
rkg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
130081813 (fmodb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
LRR_9
LRRNT
LRR_14
Motif
Other DBs
NCBI-GeneID:
130081813
NCBI-ProteinID:
XP_056102486
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MRGWIFLLLLASLVDFSMTQQTNSLTWLSYLRNRAYSHGYGRSHNNNLASLSTEDEPSVL
DCPLECDCPSTYPKAMYCNTRRLQHVPFVPSHIKYVYLQNNLITGITNGIFDNAPNLAWI
CMQTNKLSSDKIADKVFAKLPNLERLFLHNNNLSRVPQGLPRSLRDLHLNHNNISVVPVD
SFRGMSNLTALHLQMNAIEDLGNALEGLLSLTLLDLRGNQLRKIPESLPPKLSQLYLEYN
HISSIPADFLTQRPELRFVRLSHNQLTNGGIPPNAFNVSTLVELDLSFNKLERIPTISTS
LENLYLQANKIKEFSVSSFCRVVDTNNYSNLRVLRLEANAIRAQDIPTEAVLCLRLATNI
DL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttggatttttctgcttttgctggcaagtcttgtcgatttttccatgacacaa
cagaccaactctttgacctggctaagttatctgcgcaaccgagcctacagtcatggttat
ggccgtagccacaataacaatctcgcctctctaagtacagaggatgagccttctgtgctg
gactgccctttggagtgcgactgtccttctacctaccccaaagcaatgtactgcaacacc
cgcagactacagcacgtgccgttcgtaccatctcatattaagtatgtatacttgcaaaat
aacctgatcacaggaatcacaaatggcatctttgataatgctccaaatttagcttggatc
tgcatgcagacaaataaactgagctctgacaagattgccgacaaagtcttcgctaaacta
ccaaaccttgagcgcctctttttacacaacaacaacctgagccgtgttccacagggttta
ccacgttccctacgagatctacacttgaaccacaacaatatttcggtagtcccggtcgac
tctttccgtggaatgagcaacctgacggccctgcatcttcaaatgaatgccattgaagac
ctcggtaacgcacttgagggtctgctgtccttgaccctgttggacttaagagggaaccaa
ctgaggaagattccagaaagtctgccgccaaagctgagccaactctaccttgagtacaac
catatatccagcattcctgctgacttcctgacccaacggcctgagctgcgcttcgtaagg
ctgtcccacaaccagctcaccaatggtggaattccacccaacgctttcaatgtcagcaca
cttgtggaactcgatctgtccttcaacaagctggagaggattcccactatcagcaccagt
ctggagaatctgtatctccaggccaacaagatcaaagaattttcagtgagcagtttttgc
agagttgtggacacaaacaattactctaatctgcgtgtactgcgcctggaggccaatgca
atcagagcccaagacatacccactgaagctgtactctgtctgcgtctggcaaccaacatc
gacctgtag
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