Rhinichthys klamathensis goyatoka (western speckled dace): 130081847
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Entry
130081847 CDS
T09701
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130081847 (hnf1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130081847 (hnf1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_5
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130081847
NCBI-ProteinID:
XP_056102527
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MEGGEGRRAGEGSGRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERGSAGGERTDRAD
GESSEEGEMDNPPPIFHDLERLPPEEAARQRAEVDQLLQQDPWHVAKIVKSYMQQHNLPQ
REVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYIKKQTEISQQFTNASRGVMSGEES
GEDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQLA
GLGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSASSTGQTLSSSPSPGLKYSQS
VLCESLGTMRSSSGEDRGGGGRLASPVQLEPSHTLLDAHHLKPVSGGGSLPPVSTLTSLH
GLSGSSAAPPGLIMASLPSVMSLGDSSLLIGLTSSQPQTVNMGGGFTTLQPISFQQQLQG
SPQQPIAQQLQSHIGPSSFMATMAQFPCHMYSKADLSSYPSSNLLSQAMVIADSNSIGTL
TNLTAVRQILTSDPEGHTDTPIEEESLHLQSTSPEPVSSDSLELYPQTQTSETHPSHLLS
SSPGDIDPYIPTQMVSTAQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagaggggaggagagccggagaaggaagcggccggctgtcggccttgcag
gagcagctggtgtggtctctgctgggctcgggactgtccaaagagctgctgatccaggcc
atgggagacctggagagagaacggggctcggccggtggagagagaacggaccgggccgac
ggagagagctctgaggagggagagatggacaatcctcctcccatcttccatgatttagag
agacttccaccggaggaggccgccaggcaacgggctgaagtcgaccagctgttgcaacag
gatccctggcatgtggctaaaatagtgaagagttacatgcagcagcacaacctaccacag
agagaggtggtggagtccacgggcctcaaccaatcccatctctcccagcacctcaacaag
ggcacacccatgaagaaccaaaagcgtgccgccctgtacagctggtacatcaagaaacag
acagagatcagccaacaattcaccaatgccagtcgcggtgtcatgtcaggagaggaatcc
ggggaggatgtgagaaagggacggaggaatcgattcaaatggggtcctgcctcccagcaa
atcctgttccaggcttatgaacgacagaagaaccccagtaaggaggagagggagggactg
gtggaggagtgcaacagagcggagtgtcttcagaggggagtttctccttctcaattggct
ggcctgggctctaatttggtcacggaagttcgtgtatacaattggttcgcgaatcggcga
aaagaggaggcctttcgccacaaactagcactggacgttccctacagcagccaatctgct
tcctccacaggacaaacattatcatctagtccttcaccaggtctgaagtacagccagtca
gtgctgtgtgagagtttgggcacaatgagaagctccagtggtgaagataggggtggtggc
ggtcgtctcgccagtccagttcagctagaacccagtcatacactcctggatgcacaccat
cttaaaccagtatctggtggtggctccttacctcctgttagtactctcacttcattgcat
ggattgtccggatcctccgctgcccctccaggactgatcatggcctccctaccaagtgta
atgagtctaggagactcctcacttctcataggtttgacgtcctctcaaccacagaccgtc
aacatggggggagggtttactacccttcagccaatctcgtttcagcagcagcttcaaggc
tcacctcagcagccaatagcacagcagctccagtcgcacattggcccaagctccttcatg
gcaacaatggcacagttcccatgccacatgtatagcaaagcagacctgagctcttacccc
tcctccaatctcctgtcccaggctatggtcatcgcagacagcaacagcattgggacactg
actaacctcacagctgttcgacagattctcacctcagatcctgagggtcacacagacact
cccattgaagaggagtctttacatctgcaatccacttcaccagaaccagtgtcttcggat
agtttggagctctaccctcagacccagacaagtgaaacccatccttcacacctgctttcc
tcttcaccaggggacatcgacccgtacatccctacacagatggtctctactgcacaatag
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