Rhinichthys klamathensis goyatoka (western speckled dace): 130081960
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Entry
130081960 CDS
T09701
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130081960 (adamts13)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
130081960 (adamts13)
Peptidases and inhibitors [BR:
rkg01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
130081960 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
TSP1_spondin
TSP1_CCN
Reprolysin_3
Adt-1
Reprolysin_5
Reprolysin_4
Reprolysin_2
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
130081960
NCBI-ProteinID:
XP_056102672
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MWSNMGTLIWFFVVSGLLKTTALQISQCTLQKDFLESLKPQDLFYYFDTISTKSVPHFEL
VWVNCSRNESFRGLWRCSFQTEGERFELGQHRDERPVSCPTSLEMVINSTVSVVKKREDM
CCEQLKLLRPAHTRTLLPVCHGKLQGLIQSGERRLCIRPVLQKHIDHLKDLTMDLPSGVP
HLLLTHTLPVRTHLKQPKSQFRLRRTPLGSEVTHLELAVVVGPDVYDVHRQDTERYILTN
LNIASELLRDVSLGANIRVHLVRMVILTEPKPDIQISENITSSLKSVCEWGQKVNPDADS
DPLHADLLLYITRFDLVLPNGNKLVRGVTQLGGVCSTQWNCVITEDTGFDLGITIAHEIG
HSFGINHDGIDNTCSSSGFMMASDGGYNSVDLTWSQCSRAQFHNFFSAGKAECVKDVPVL
GGSVQDWRPGLFYGVDDQCRIAFGSSATACSFTNDDMANCRVLSCHINPRDRSSCTRLLV
PLLDGTECGPSQWCFKGRCVSPTLGSSMMVHGSWSSWSEFSPCSRTCGGGITYRRRQCNN
PRPAFGGSLCKGQDLEAELCNRQPCESTQLEFMSQQCSATDQQPLSVSTDSSSVYTWIPA
VSYTSGDAQCKLMCRSREQDFMVSRGSQFIDGTRCEAGNTVSRGSISACLGGKCQLFGCD
GVMHSGKLEDVCGVCGGNGSTCQLISNSYSGGEAGEYVTFLTLPMNTSQVHVINTKPVFT
HLAVLLNDKYVVSGDGSPGLSITYPSPLEKSPIIYNLYLAPDHQPQTEELTISGPVTDKI
HIQVFRKYGQEYGDLTSPNITYQFYSFDAVSVERAVQGRWSTVISTCSVTCGTGIQKISQ
HCVDVVTFEHLEDKLCSSPQTPDLLQPCFLPNCPPSWESGEFGPCSAPCGVGERVRSVTC
FQKQGTVKVELPDPDCTLDSKPPTTETCNSQICPARWQVSEPGECSAVCGPGEAQRTVLC
VRSHHGSDSEVDQNLCSEPKPPEHVPCVVDVCPVGWDSQKETELTRTDSRVMPRSTMVPV
YVWSPVIGQCSKTCGNGSQQVWFSCVDHQSRLEVPEFLCDRTSKPELYTQPCSPSKCPNV
WRYIQGPCSVSCGGGLAKRVLYCSQRVEGGVGNRDLVVGESSCQSVPRPSEVVECNTEIC
PARWQVGQQSECSVSCGMGVAVRSVQCVQYERGVERIVEEERCVSGNKPPVTAPCFTQVC
SFHWDVHKWSECSVSCGYGIQSRAVSCMGPSSPLPVSPFLCLHLPKPITIQACYSPDCSS
AHTFTPEPKGTHIQSEHQRGDGMWGTPKVHTRTTIGPDVRIKKMKKSFSAIVPTVDLMES
AMSMPTEPPQTSFCGQLLLQDSGTIDLRNVTQTRCIFAIGRPLDEVIQIKIVSSTLNCRQ
RENIALYDRLILMRLCERTTGKTLKSRSNVLLVRQSRLTPGNGVVLFYQSLKNKKSPHGE
CDVQLFSPSGLIENPIKSPAISPSNTQSCRVFIDAPPALRIQIRALSVLNNTDTNSTYIL
IRDVDALKTTIFRGTRLFLWSSSGSRAEVEFHGEYQQIKGMFRAEYSYIDPSEEEPV
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaaacatgggaacgctgatctggttctttgtagtttctggcttgttaaaaaca
acagctctacagatttcacaatgcactttgcagaaggattttttagagtcactgaaacct
caagatttattttattattttgatactatttccactaaatcagtgcctcactttgagctg
gtgtgggtgaattgctcgaggaatgagtctttcagagggctgtggaggtgctcgtttcag
accgaaggagagagatttgagttgggccagcacagagatgaacgaccagtgtcctgtccc
acaagtctggagatggtgatcaactcaacggtcagtgtggtgaagaagagggaggacatg
tgctgcgagcagctgaagttactgagaccagcacatacaagaactcttctccctgtctgc
catggcaaattacaaggtctgattcagtcaggggagaggaggctgtgtattcgcccagtg
cttcaaaaacacatagaccatctgaaggatcttactatggatttaccatctggtgtacct
cacctgctattaacccacacattaccagtgaggacacatcttaaacagcccaagagtcag
ttcaggttacggaggacacctcttgggtcagaggtcacacatctggagctagcagtggtg
gtgggtccagatgtttatgatgttcataggcaagacactgagagatacatcctaaccaac
ctcaacatcgcctcagagcttctgagagatgttagtctcggtgccaatataagagttcac
cttgtccgtatggtcattctcacagagccaaagccagacatccagatctctgaaaacatc
acctcttctctaaaaagtgtgtgcgagtggggtcagaaggtcaaccctgatgctgactct
gaccctttacatgcagatctgctgttatacattaccaggtttgatctggtgttacccaat
gggaataagcttgtgagaggtgttactcagctgggaggagtttgttccactcagtggaat
tgtgtgattacagaggatacaggctttgatctcggcatcaccatcgctcatgagattggc
cacagttttggcataaatcatgatggaatagacaacacatgcagctctagtggcttcatg
atggcatctgacggaggttataacagtgtcgatctgacctggtcccagtgcagcagggct
cagttccacaacttcttcagtgctggtaaggctgagtgtgttaaggatgtgccggtactg
ggtggttcagtgcaggactggaggcctggtcttttctatggagtggacgatcagtgccgt
atagcgttcggcagctcagctactgcttgttctttcactaatgatgatatggcaaactgc
cgtgttctgtcctgccatatcaaccctcgtgaccgtagctcatgtacacgtctccttgtt
ccgctcctggacgggacagagtgtgggcctagtcagtggtgttttaagggtcggtgtgtg
tctcctactttgggttcctccatgatggttcacggctcatggtcttcatggtctgaattc
tctccctgctcacgaacatgcggaggaggaatcacttaccgcaggaggcagtgcaataac
cccaggccagcctttggtggttccctctgtaaaggacaggacttagaagctgaactttgt
aatcggcagccctgtgagtcgactcagctggaattcatgtctcagcaatgctcagccaca
gaccagcagcctctttcagtgtctacagactccagctcagtctacacctggatccctgcc
gtcagctacacctcaggtgatgctcagtgtaaactgatgtgtcgctcacgtgagcaggac
ttcatggtgagtcgtgggtctcagttcattgatgggacacggtgtgaagctggtaacact
gtatcacgtggttccatttctgcctgtttgggtggaaagtgccagctgtttggctgtgat
ggagttatgcattctgggaagttggaggatgtgtgtggggtgtgtgggggcaatggctcc
acctgccagttaatctcaaacagctattcaggtggagaggctggagagtatgtcactttc
ctcacccttcctatgaacacctctcaggttcatgtgattaacacaaagcccgtttttaca
caccttgcggtgttattaaatgataaatatgtggtgtctggagatggaagcccagggcta
agcatcacatatccctcacctctggagaagagccccataatctataacctctacctcgca
cctgaccaccaacctcaaactgaagagctcactatttctggaccagtcacagacaagatc
cacatacaggtgtttcggaaatatgggcaagagtatggagacctcaccagtccaaacatc
acataccagttctactcatttgatgctgtttcagtggagagagctgttcagggcagatgg
tccactgtcatatctacctgctcagtaacctgcggtacaggcatccagaaaatcagtcag
cactgtgtagatgtggtcacattcgagcacctggaagataagctctgttcatcccctcaa
acaccagatctgctgcagccctgctttctgccaaactgcccacccagctgggagtcaggt
gagtttggaccctgcagcgccccctgtggagtgggagagcgagtgcgctctgtgacgtgt
tttcagaaacagggtacggtgaaagtggagctgcctgaccctgactgtactcttgactct
aaaccaccaacaactgaaacctgcaactcccaaatctgtcctgccagatggcaggtgtct
gagcctggtgagtgctcggctgtgtgtggacccggggaggcccagagaacggtgttgtgt
gtccgctcccatcatggatctgattctgaggttgaccaaaatttgtgttctgaacccaaa
cccccagaacacgttccctgtgtggtggacgtttgtcctgtcggctgggatagccaaaaa
gagactgagctgacccgtacagattcccgtgtaatgccccgttccacaatggttccagtt
tatgtttggagtcctgtgattggccagtgctccaaaacctgtggcaacggatctcagcag
gtttggttctcctgtgtggatcaccaatcccgtctagaagtcccagagttcctttgtgat
cgcaccagtaaaccagagctgtacacccaaccctgtagcccatcaaaatgtcctaatgtt
tggcgctacatacagggaccgtgcagtgtgtcttgtggaggtggtttagcgaagagagtc
ctgtactgttcccagagggtggagggaggagtcggaaacagggatttggtggtgggagag
tcttcttgtcagtctgtgcccagaccttcagaggtagtggagtgtaatactgaaatctgt
ccagccaggtggcaggtgggacagcagagcgaatgttcggtgtcttgcgggatgggcgta
gctgtgaggagtgtgcagtgtgttcagtatgagaggggtgtagagaggatcgtggaggag
gagcggtgtgtgtcaggaaacaagcctcctgtcactgcaccatgcttcactcaagtctgt
tctttccactgggatgtgcacaagtggagtgagtgttctgtctcgtgtggttatgggatc
cagtctcgggctgtgtcctgtatgggcccatccagtcctcttcctgttagtccctttctt
tgcctccacttgccaaaacccatcaccatccaggcctgctatagccctgactgttcttca
gcccataccttcacaccagagcccaaaggcactcacatccaatcagagcaccagagagga
gatgggatgtggggaactccaaaagtgcatacgagaaccacaataggtccagatgtcaga
attaagaagatgaagaagagtttttcagccattgtacctacggtggacttgatggaaagc
gccatgagcatgccaacagaaccaccacagaccagtttctgtgggcaacttctccttcaa
gactcaggaactattgatctacgcaatgtcactcagacgaggtgtatatttgctattggc
cgacctcttgatgaggttattcaaatcaaaatagtatctagcactcttaactgccggcaa
agggagaatatcgccctgtatgatagactcatcctgatgcgcctctgcgagaggacaact
ggtaaaacactgaaatcacgatcaaatgttcttttggtgcgtcagagccgcctgacccct
ggcaacggagtggtactattttatcagagtttaaagaacaaaaaaagccctcatggagag
tgtgacgttcagctgttctctccgtccgggctcattgagaatccgatcaagagtccagcc
atctcaccctctaacactcagagctgtcgcgtgttcattgatgctcctccagcattgagg
attcagatcagagcactttctgtgctcaacaatacagatacaaactcaacatacatactg
attcgtgatgtggatgccttaaagacgaccatattcagagggacacggctcttcctgtgg
agctcctcgggaagcagggctgaagtggaattccacggggagtatcagcaaatcaaggga
atgttcagggccgagtattcgtacattgacccttctgaagaagaaccagtgtag
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integrated database retrieval system
