Rhinichthys klamathensis goyatoka (western speckled dace): 130081977
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Entry
130081977 CDS
T09701
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130081977 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130081977 (lsm1)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130081977 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
130081977 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
130081977
NCBI-ProteinID:
XP_056102692
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All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagcctcatcgaggacattgataaaaaacaccttgtt
ctccttcgcgatggaagaacattgattgggatccttagaagcatagatcagtttgccaat
ttagttttgcatcaaacagtggaacgaatccacgtaggtaaaaaatttggtgacatacct
cgtggaatatttgtcgtgagaggagaaaatgtcgtcttgcttggggaagtagatctggat
aaagaatgtgatcaaatcctccagcgagtttccattgaggaaattctggaggaacagcgg
acagaacagcaagccaagcaggagtcagagagattgaagctacaggcagtgaaagagcga
ggtttatcgatccctaaagctgacacgttagatgatttctga
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integrated database retrieval system
