Rhinichthys klamathensis goyatoka (western speckled dace): 130082019
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Entry
130082019 CDS
T09701
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130082019 (ybx1)
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130082019 (ybx1)
03041 Spliceosome [BR:
rkg03041
]
130082019 (ybx1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
130082019 (ybx1)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130082019 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
130082019 (ybx1)
Spliceosome [BR:
rkg03041
]
Common components
Common spliceosomal components
General mRNP proteins
130082019 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
130082019
NCBI-ProteinID:
XP_056102741
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MSSEAETQQQPPQPAADVESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYA
ADRNRYRRYPRRRGPPRDYQDNYQSDGEGEVREKREGEENPPEGDMEQQERRPTYPGRRR
YPPYFVRRRYGRRPPYSNTPQRGDMTEGGEVEESQGGPDPGNKPMRQNYYRGFRPRFRPS
RGPPRPRPVREPREGEEDKENQSESGQSQEPRQRRYRRNFNYRRRRPQTTKPQDGKDSKA
ADASAEKSAAPEAEQGGAD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgaaacacagcagcagccgccgcagcctgccgccgacgtggagagc
ccgtccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaacaaaagtc
ctggggacagttaaatggttcaatgtaaggaacggctacggtttcatcaacaggaatgac
accaaggaagatgtctttgtccaccagaccgccattaagaagaacaatccaaggaaatat
cttcgtagcgttggggatggagagactgtggagtttgacgtcgtagaaggggagaagggt
gccgaggcagccaatgttaccggccccggtggcgtccctgtgcagggtagcaagtatgcg
gctgacaggaaccgatacaggcggtacccacgcaggaggggcccccctcgtgactaccag
gacaactatcagagcgacggggagggagaggtacgggagaagagagaaggggaagaaaat
ccccctgagggtgatatggagcaacaggagcgtagacccacctaccccggcagacggcgc
tacccaccatactttgtgcggagacgttacggcagacgtcctccctattccaacacaccc
cagagaggagacatgacagagggtggggaagttgaagagagccaaggtggtccagaccca
ggcaacaaaccaatgaggcagaactactacagaggcttcagaccaaggttcagacccagc
aggggtcccccacgtccccggccagtgcgggaacctcgggaaggggaggaggataaggag
aaccagagcgagagtgggcagagccaggagccccgtcagcgccgctaccgtcgcaacttc
aactaccgccgcagacggccccagacaaccaagcctcaggacggcaaggacagcaaggca
gccgatgcatcagccgaaaaatcagccgctcccgaagccgaacagggcggagcagattaa
DBGET
integrated database retrieval system
