Rhinichthys klamathensis goyatoka (western speckled dace): 130082155
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Entry
130082155 CDS
T09701
Symbol
nr5a1a
Name
(RefSeq) steroidogenic factor 1a
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130082155 (nr5a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130082155 (nr5a1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
130082155 (nr5a1a)
Nuclear receptors [BR:
rkg03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
130082155 (nr5a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130082155
NCBI-ProteinID:
XP_056102917
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MMEFPADEELEEQCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTQNQDCGIDK
TQRKRCPFCRFQKCLSVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKRALIRASGFK
IEGNPTLMSTGQTEYPHPGSLSVLHLPPLSSPEYECPPLCPPALSVALQSYGSFPAQYQY
SAPRSIKAEYPDVYSSSPDSSLGYPYPDGCMPASPHSSPMNPGLPPLVLELVSYDPDEEQ
VRGKICAYLHQEQSGRGKLDKPRAFSLLCVMADQTLFSIVEWARSCVFFKELKVGDQMRL
LHNCWSELLLLDHICRQVHHGRDNSLLLITGQEVDLSAVCDAGPPLSSMVQRGQDLARRL
QLLQVDRREMACLKFLILFNPNVKLLENQPLVESVQEQVNGALLEYTLFSYPQCVDRFGQ
LILRLAEVRSLSAQAEDYLCYTHLCGEVPCNNLLIEMLHAKRSTAV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttccctgcagatgaagagctggaggaacagtgtcctgtgtgtggagataaa
gtgtccgggtatcattacggtcttctgacctgtgaaagctgtaagggttttttcaagagg
acggttcagaataacaagagatacacgtgcacacagaaccaggactgtggcatcgacaaa
acccagcgcaagagatgtccgttctgccgcttccagaagtgcctgagcgtcggcatgaga
ctcgaggctgtccgtgcggatcgaatgcgagggggaaggaacaagttcgggcccatgtac
aagcgcgaccgtgccctgaaacagcagaagagagctttaatcagagccagcggctttaaa
atcgagggcaacccgaccctcatgtccaccggtcagacggagtaccctcatcccgggtcg
ctctcggtcctccacctgccgcctctctcgtctccggagtacgagtgtcctcctctctgt
cctccagccctgagtgtggcgctgcagagctacggctcattcccggctcagtaccagtac
agcgctcccagatccattaaagcggagtacccggatgtgtactctagctctccagactcc
tctctgggatacccgtaccctgacggctgcatgcccgcgtcccctcactccagtcccatg
aaccccgggctccccccgctggtgctggagctggtcagctacgacccggatgaggagcag
gtgcgagggaagatctgtgcgtatctccaccaggagcaaagcggccgagggaaactggac
aaacctcgagccttcagcctgctgtgtgtcatggcggatcagacactcttctccattgtg
gagtgggcaagaagctgtgtcttcttcaaggaactaaaggttggagatcagatgcgactg
ctgcataactgctggagcgagctgttgcttctcgatcatatctgccgacaggtgcatcat
gggagagacaacagtctgctgctcattacaggacaggaggtggatctgtcggcggtgtgt
gacgcgggaccgcctctgtccagtatggtccagagaggacaggatctggccaggagactt
cagcttcttcaggtggacagaagagagatggcctgcctgaagttcctcatcctcttcaac
cccaacgtgaagctcctggagaaccagccgttagtggagagtgtgcaggagcaggtgaac
ggggctctgctggagtacacactcttctcgtaccctcagtgtgtggatcgcttcggtcag
ctgatcctgcgactggcggaggtgcgttcgctgagcgcgcaggccgaggactatctgtgt
tacacacacctgtgtggagaagtgccctgcaacaacctgctcatagagatgcttcacgcc
aagaggtcgaccgcggtgtga
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