Rhinichthys klamathensis goyatoka (western speckled dace): 130082206
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Entry
130082206 CDS
T09701
Symbol
pou2f1a
Name
(RefSeq) POU domain, class 2, transcription factor 1a isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130082206 (pou2f1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130082206 (pou2f1a)
03021 Transcription machinery [BR:
rkg03021
]
130082206 (pou2f1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130082206 (pou2f1a)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
130082206 (pou2f1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Ribosomal_S8e
DUF2857
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130082206
NCBI-ProteinID:
XP_056102940
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MADRGSTTQDDRSTADSSPADLSHSTMESRGLPAAPAEGPDTHTPDTHTPDTHTPSAPAA
SAVSNAQAQALLQQVFLQQTQAQLMAAAGHQSSSSGASISASAATPITLAPPIQMASGLA
PQGMNLQQFVLVPSGHSISPQIQPQFIISPSPQGQTGLLQAQNILTQLPQSQASLVPTQT
SLTLTTQAATPTRKIAAMPSPACPGPKRVDGPCVEEAGDLEELEQFAKSFKQRRIKLGFT
QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENMSADCMVSSA
SEMSPGLCESLNRRRKKRTSIETTIRLALERSFLEQSQKPSSEEITLIADQLNMEKEVVR
VWFCNRRQKEKRINPPSSCSGSPSAIKAIYSSANTVSSTNTLTVNSVVPLNASNISNFTL
SGGTLAQVTSHTPSVISMAPVATPVTSSSLSPSVTSVKQEAVSTATTLTQGAGQFLVTGT
GFNPTFITPSQLTQGGTLLSFSPALGNTLMNNNTLATIQAALASGGAFPLTSFDGNTGLL
FANTSAGSPAPGLMTTPFFLNPSGFSLLPANLLSGGGAGGGALNLHVTSDVQQSPVAMTT
KSVALASKAQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaggatcaacgactcaagatgatcgctcgactgcagattccagcccagcg
gatctgagtcacagcaccatggagagccgaggacttccagcagctccagccgagggtccc
gacacgcacacgccggacacacacacgccggacacacacacgccgagcgcaccggcagcg
agtgccgtcagcaacgctcaggcgcaggcgctgctccagcaggtgttcctgcagcagact
caggctcagctcatggcagctgctggtcatcagagcagttccagtggcgccagtatctcc
gcctccgcggccacgcccatcactctggccccgcccattcagatggcctcaggtttggct
cctcagggcatgaacctgcagcagtttgtgttggttccgtcgggtcactccatcagtcct
cagatccagcctcagttcatcatctctccgtctcctcagggtcagaccggtctcctgcaa
gctcagaatattctgactcaactacctcaaagccaagccagccttgtgccgacccagacc
agcctcacactcaccacacaggcggcgaccccgacgaggaagatcgcggcgatgccgtct
ccggcgtgtcccggcccgaagcgcgtggacggcccgtgtgtggaggaggccggcgacctc
gaggagctcgagcagttcgccaagagcttcaagcagaggcgcatcaagctgggcttcact
cagggggacgtggggctggcgatgggcaagctctacggaaacgacttcagccagaccacc
atctccagattcgaggccttgaacctgagcttcaagaacatgtgcaagctcaaacccctg
ctggagaagtggctgaacgacgccgagaacatgtccgccgactgcatggtgtcgagtgcg
agcgagatgtctccgggtctctgcgagagtctgaaccggcgccgcaagaagcggaccagc
atcgagaccaccatacgcctggccttagagaggagctttctggagcagagtcagaagccc
tcgtcagaggagatcacactgatcgcagatcagctcaacatggagaaggaggtggtgcga
gtctggttctgtaaccgcagacagaaggagaagaggatcaatcctcccagcagctgcagc
gggtcaccgtcagccatcaaagccatctacagcagcgccaacaccgtgtccagcacgaac
acgctaacagtaaattctgttgttccactgaacgccagcaacatctcaaacttcacgctc
agtggtggtactctggctcaggtgacgtcacacacaccctcggtcatctccatggcgccc
gtcgctacgcccgtgacatcgtcgtcattgagcccgtccgtcaccagtgtgaaacaggag
gcagtttccacggcaaccacgctcacgcagggggcggggcagttcctggtgacgggcaca
ggatttaacccaacgttcatcacgccctcgcagctgacgcaaggtgggacgctgctgagt
ttttctcctgctctgggaaacacactgatgaacaacaacacactggccaccatccaggca
gctcttgcatcgggcggcgcttttcctctgacgtccttcgacggaaacactggcctgcta
ttcgccaacaccagcgcaggaagccccgcccccggcctgatgaccacgcccttcttcctc
aacccctccggcttctctctgctgccagccaatctcctgtcagggggcggggcaggaggc
ggagctctcaacctgcatgtgaccagtgacgtgcagcagagtcccgttgccatgacgacg
aagagcgtggccttggcctcgaaggcccagtga
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