KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130082381
Entry
130082381         CDS       T09701                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130082381 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130082381 (aptx)
Enzymes [BR:rkg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     130082381 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     130082381 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     130082381 (aptx)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     130082381 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     130082381 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA
Other DBs
NCBI-GeneID: 130082381
NCBI-ProteinID: XP_056103211
LinkDB
Position
Unknown
AA seq 339 aa
MPVCLIVREDDSHHKPIQLHHQQAVTLGRGPETKIKDKKCSREQVELRADCNRGFISVKQ
LGVNPTYVDNVVVGKGNQVTIKPGQRLYMVNQLYPYTVKFTEETFTARSAAEGSKASKRS
HRMSSEGNGEKSPANTTSSSEGSPPAKKTPPPPGPDKSESAGHWSQGLKVSMQDPKMQVY
KDDRVVVIKDKYPKARYHWLVLPWDSISSLKALRPEHVDLLKHMQRVGDRMVQQCRDAHK
LHFRMGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFVESQDVVAMLERDGKV
TVKEGASELLKLPLRCHACRKEQPTIPKLKEHLKTHLPA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgccagtgtgtttaatagtacgtgaagatgattcacatcataaacccattcagcttcat
catcaacaagctgtgactttgggtcgaggaccagaaactaagataaaagacaaaaagtgc
tcaagagaacaagttgaattgagagctgattgcaacagaggatttatctcagttaaacag
ttgggtgtgaatcctacatatgtggacaatgtggtcgtgggcaaaggcaatcaggtgacc
ataaagccgggccagagactttacatggtcaaccagctgtatccatatacagtgaagttc
accgaggagacgttcacagcccgatccgctgcggaggggagcaaagcctccaaaagatcc
catcggatgagctctgagggcaacggagagaagagtcctgcaaatactacatcatcatcc
gaaggttcacctccagccaaaaagacaccaccgccgcccggacctgataaatcagaatct
gctggccattggagccaagggcttaaagtgtcaatgcaggaccccaagatgcaggtgtac
aaagatgacagggtggtggtcatcaaggacaagtacccaaaggcgcgttaccattggctg
gttttgccgtgggactcgatctccagtctgaaggctctgcggccggagcacgtggacctg
ctcaagcacatgcagcgtgtgggagatcggatggtgcagcagtgccgggacgctcacaaa
ctgcacttccgcatgggatatcacgccatccccagcatgagtcacgtccacttgcacgta
atcagccaagacttcgactcgccgtgtttgaagaacaagaagcactggaattccttcact
acagactattttgttgagtctcaagacgtggttgcgatgctggagcgtgatgggaaagtg
acggtgaaggaaggtgctagtgaactactgaagctgcctctgcgatgtcacgcgtgtcgt
aaagagcagccgacgatacccaaactcaaagagcatctcaaaactcacctgcctgcttaa

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