Rhinichthys klamathensis goyatoka (western speckled dace): 130082770
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Entry
130082770 CDS
T09701
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130082770
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130082770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
130082770
NCBI-ProteinID:
XP_056103595
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MKGGGGGKEPPVEGEISGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCTE
SVAPEGVCGGTEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSHSVSNSRKKVWSLPS
NPNKDPSVAKKQAKTDSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREISSSSSQTGCT
DVAKHTGKSALFQLAEISSSPVQPAGGSKNAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRSQSASEGRQCGQSALFQLAEMCLASEAEKIEARSSQPSGGSSSLCAQ
HSSISTAIPDHEEQRDPPEEQRDPPELPLTTSSSSTSGSTSSSPTDAIPSDISPCKTPKK
KKKKKENKESDTNPPSPKKAKKRQSSESDLDSVMFTIEAVAKGTWGSEETPKKKARPSES
ESSPSTDQSPSVKKKKSKPKKQLKLKDDATEEEEEGDEEANKPQDIVEIKTEEAPLTPKA
ECENEPDLEEEPPSGVEDMEPHCSPLQTTELEEKDTDTKPTQTTQEDKDLEVKPENCGSR
KSERSCKGALYKTLVSEGMLTSLRANVDRGKRGSMRGSVSDHEGGWNDESWGFSQAATSN
PKKLKKSKSKEETAQGLGKLEEEFEKKFNSLPQYSPLTFDKKSVAVTKKKKTSTSSPPEP
PKPCKGSSSSQKKTLFHKIVNKYKHRKEKSSAADKDIDTPDPMVTESSPVKSGSPCVSPS
PEPQKVLDTPVGSQKRKARKSKITHLVRTADGRVSPAEAEDKSKDQTKNQDEKPFTQETL
CNSGVCYNDPRSAEVDAPDTSGGLPAFFSLAALAEVAAMENVHRAQRAVSIPTEGQVKDM
APVLISCADQ
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggtggagggaaagaacctccggtggagggagagatcagcggaaagcga
cccaaacgcaagtgtctgcagtggcacccgctgctggccaagaaagctccagacttctct
gaggaagaggaggaggaagatgaagaagagctggagaaggagccggtgttatgtacagag
agcgtagctccggaaggagtgtgtggtgggacagaagatgacagtgaagaatactcctct
gagcagcgggctcgccggcccatgaacgcctttctgctgttctgcaaacgccaccgctcg
ctggtccgacaggagcatccgcggctagacaaccggggggccactaagatcctggcagac
tggtgggccgtactggaccccaaagaaaaacagaaatacacagacatggctaaggagtac
aaggatgcgttcatgaaagctaaccctggttacaaatggtgtcctgccaccaacaagccg
gtaaagagtccctcccactctgtgagtaactcccgcaagaaggtctggtctcttccctcc
aaccctaataaggatccttcagttgccaaaaaacaggccaaaactgacagcacaccccag
ctcaacttcgccatggctgatcccaataagatggggggcctaagcatgctgctgttagcc
ggggagcacgcgctgaccgccagagagatttcctccagctcttcccagactggatgcaca
gatgttgctaagcacactgggaaatcagcccttttccagctggctgagatttcttccagt
ccagtgcagcctgctggaggaagtaagaacgctgaggacacaagctctctcacacacgta
gaggcctctggaccatcccagccaagctcacctgacctgcccaagagttgtgttaaatca
cccctgtttcagctggctgagcagatctcctccagtaggtctcagtcagcatctgaggga
aggcagtgcggccagtcggctcttttccagctcgctgagatgtgtttggcctctgaggcg
gagaagatagaagctcgatcctcccagccctctggtggttcctcctctctctgtgctcag
cacagctcaattagcacagccatcccagaccacgaagagcagcgggaccctccagaagag
cagcgggaccctccagaacttcctctcaccacatcgtcatcctctacctccggctccacc
tcatcctcccctactgacgccatcccttctgacatcagcccttgtaagacgccgaagaag
aagaaaaagaagaaagaaaataaagagtctgacacaaatcctccatcacccaaaaaggcg
aagaagcgccagtcgtctgagtcagatctggacagcgtaatgttcaccattgaagcggtc
gcaaaaggtacttggggctcagaagagacacccaagaagaaagctcgtccctcagagagt
gaaagcagcccttctacggaccaatctccatctgtgaagaagaaaaagtctaaaccgaaa
aaacagctcaagttaaaagacgacgccacagaagaagaggaagaaggggacgaagaggct
aataagccacaggatattgtagagataaaaactgaggaagctcctttgacccctaaagct
gagtgtgagaatgaaccagacttggaggaagagccccctagtggcgtggaggacatggaa
ccacactgctctccactgcaaacaacagaactggaagagaaagacacagacaccaaacca
actcaaaccacacaggaagataaagacctggaggttaagccagagaattgtgggtccagg
aagtctgagcgaagctgtaaaggagcgctttataagactctggtgtccgaagggatgctc
acatcactgagagcaaatgtagacagagggaaaagaggttccatgcgaggcagtgtgtct
gatcatgagggcggctggaatgatgaaagctggggattttctcaagctgctaccagcaac
ccaaaaaagctcaagaagtccaagtctaaagaggaaaccgcccagggactaggaaagctt
gaggaggagttcgagaaaaagttcaacagcttaccgcagtacagccccctgacatttgac
aaaaagagtgtggctgtcaccaagaagaaaaaaaccagtacatccagccctcctgaacca
cccaaaccttgcaagggttcatcttcatctcagaaaaagaccttattccacaagatagtg
aacaagtacaaacacaggaaggagaaatccagtgccgcagacaaagacatcgacacacct
gaccccatggttacagaatcaagtccagtgaagtcgggcagtccgtgtgtgtctccctct
cctgaaccccagaaggttctggacacacctgtgggcagtcagaaaaggaaggccaggaag
agtaaaatcacacacttggtgcgcacggccgatggccgagtgtcacctgcagaggcagaa
gacaaatctaaggatcagaccaagaatcaggatgaaaagccattcactcaagagacatta
tgcaatagcggggtctgctacaatgaccccagatcagcggaagtggacgcgccagatacg
tccggtggcctcccggccttcttcagcttagctgctctcgctgaggttgcagccatggag
aatgtgcacagagcccagcgtgctgtgagcatccccactgaaggtcaagtgaaggacatg
gctcctgtgctgatttcctgcgcggaccagtga
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