Rhinichthys klamathensis goyatoka (western speckled dace): 130082780
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Entry
130082780 CDS
T09701
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130082780 (med13a)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
130082780 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
130082780
NCBI-ProteinID:
XP_056103613
LinkDB
All DBs
Position
Unknown
AA seq
2154 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFYLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGDDPNFSDLIHHELTGEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKREHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYHLSEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPTSKESAEDKMEDIDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPITVTPTGSS
HCTAVYSNGHQVPASNRDPAISSVTLTPPTSPEEAQTVHSHSAQKWMRLPMAMDGFSVDS
TSHHGGKIPRRMASQVVDGVWQECNINRAQNKRKFSATASNGTSEEETLMKVGAWDFVDS
TQRSNCNCSRHKTLKQRGGSTPGQPPSAGQTQQPPIKHKAGEKPEKGDKQQKRPQTPFHH
RNSVCEDVPMETDTSAGQRLALRGQEGGRFPGLRPSDGSTGSKPPQLHSGGGATVGNSGP
TEMVGSPQPPPLSPHPCERGEEASDAIKNPSTPHSQHFYPPSAEPCLQKGPDDARLDPLT
QPFPPTYSEPLEPTPYISAAVNLDDDGSHAPWRFFNLPRRKDAEFPTPSLPGDKLREEVL
LGAEGIMSATESMVASKRPLKVSDERLQTYLQRQNQHLAAAITGNDHEPEVDPYAFVDGD
VKFTFSDKKDKAGGDREPGKKHKGEDGSAALSDDAQRAAANNRATSTSLIHDSDLAVSIK
DLDNLFNSDEDEQTPGARRAVNGADEKFGSKESKPATLDPVSCISTADLHQMFPTPPSLE
QHIMGYSPMNMGSKDGCMEPGSGLNTLDGSTVLGGQFKIEVEESFCSPKPSEIKDFSFVY
KPEFCQPFVGCSMFAPLKSLPSQCLPPIKLPDECVYRPSWTVGKLELLNSVPAMSLFSKD
GENNAMEQEYIQTYTPTQTHTPFLSNSAPPSNSGANILPSPATPRFSAPTPRTPRTPRTP
RGPASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNL
FKDCNFDSCCICVCNMNIKGADVGIYISDPNMEAQYPCGCGFSAVVNRRYGNGSGLFLED
ELDIIGRGSDVSQEAEKRFEVLRSMSLEKTGGGGKDRVPDELISLLQDQCTNPFSPILAL
DPEGLSSQGPGGATVPPCVRVEERDFHNDCYLALEHGRQFMDNMSGGKVDETLVKSTCLH
HWAKRSAVDVSGLCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGRG
SYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYLVLCPDSDA
LLTGAKSFFRELTAVYESCKLGQHRPISKVYADGIVRVGGAAAKKHSEQPVNDWFLKAAG
GSSDAFAKLKLFAQVCRHDLAPYLATQLLDSSLLIQPNPIPSSSQSSSSQSSSNLQTSTA
SGGSALNNNSAASNSGSGLSGNTNNTSSSSSGPQGSSIQSAKPSSFPPYGSMGVQGNSSQ
SGALGQQAVTQNSSLSGDNSAVNSQTQGPSEPPESTMEREKVGVPTDGESHAITYPPAIM
IYVVDPFSYEEAEPGTSQSSMWTMGLLRCYLEMLQVLPAHIRNSVFVQIVPSQYLLQPVR
SEERHLYAQHLKSLAFSVFTQCRRPLPTSTNVKSLTGFGPGLALDTSLRNPDRPECLRLY
TPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLETCII
SIDVPNRARRKKGSARKLGLQKLWEWCLGLVQMTSLPWRVVIGRLGRIGHGELRDWSILL
SRRNLQSVSRRLKENCRLCGISAADTPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRST
TLNMQTSQLSTPQDTSCTHILVFPTSAFVQVNSSNYPHENIDLAFNGGNDGSDPIGGIFD
LLEQEGNDLVDSDIINILPASPTTSPVHSPGSQYPHGGDGSKGQSTDRMESHEEAPNILQ
QPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSKHSHP
LDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMTML
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtttcgtaccgaacggggccagcttggaggactgccattccaatctattc
tatctggctgacttgacggggataaaatggaagaggtacgtgtggcaaggtccgacctcg
gcgcccattctgttcccggtcacggaggaggaccccatcctctgcagcttcagccgctgt
ctaaaggcagatgtgctgagcgtgtggaggcggagccagaggcagggacgcagggagctc
tggctcttctggtggggtgacgatcccaacttctctgatctcatccaccacgaactcaca
ggcgaggatgacggcgtgtgggagagcggtctgtcctacgaatgtcgaactcttctcttc
aaggccattcacaacctgctggagcgctgtctgatgaaccgcagtttcgtacgcattgga
aaatggttcgttaaaccctacgaaaaggatgagaagcccataaacaagagagaacacctg
tcttgctccttcacgttcttcctgcatggagacagtaatgtgtgcaccagcgtggagatc
aaccagcaccagcccgtataccacctgagcgaggagcacctgacattggcccagcaggcc
tccagccctttccaagtgattctgagtccatttggactgaacgggacattgaccggccag
tccttcaagctgtctgaccctccgacacagaagctcattgaagaatggaaccagttctat
cccatcagcccgacctccaaggagagcgcagaggacaagatggaggacatcgactgggag
gacgactccctggcagcagtggaagtgcttgttggtggtgtgcgcatggtgtatcctgca
tgcctagtgttagtcccgcagtcagacatcccgatcactgtaacacctacggggtcgtcg
cactgcactgctgtctattcaaacggccatcaagtgcctgcttcaaaccgtgaccctgcc
atctcttcagtgaccctgactcctcccacctcaccagaggaagctcagacagttcactct
cactcggcacagaagtggatgcggttgccgatggcaatggatggattcagtgttgatagc
accagtcaccatggtggcaagattccacgcaggatggccagtcaggtggttgatggcgtc
tggcaagagtgcaacatcaaccgagctcagaacaaacggaaattctccgccacagcctcc
aatgggaccagcgaggaggagacactgatgaaagtgggcgcctgggactttgttgactcc
acacagagatcaaactgcaactgttcaaggcacaaaacattgaagcagagaggaggcagc
acgcctggtcagccgcccagtgccggtcagacgcagcagccgcccatcaagcacaaagcc
ggagagaagcccgaaaagggagacaagcagcagaaacgcccgcagacacccttccaccac
cgcaactcagtctgcgaagatgttcccatggaaactgacacttctgcaggccagcgcttg
gctcttagaggtcaagagggtggacgatttcctgggctccgcccatctgatgggagcact
ggctcaaaaccgccacagctacacagcgggggcggagctaccgtgggcaacagtggcccg
acggagatggtcggttcccctcagccaccaccactgagccctcacccctgcgaacgtggc
gaggaagcctcagacgccattaaaaacccctccaccccacacagccaacatttttaccct
ccttcggcagaaccatgcctccagaagggcccagatgacgcccgtttggatcccctcacc
caaccttttccccctacatactccgagcccttggagcctaccccgtacatcagtgcagca
gtaaacctggatgacgacgggagtcatgcgccgtggagattcttcaacctgccacgtagg
aaagatgcagagtttcccacgccatcactaccaggagacaaactcagagaagaggtgtta
ctcggagctgaagggattatgtctgctactgagtcaatggttgcctccaaaaggccgctc
aaggtctcagatgaacgtctccaaacgtacctgcagcgacagaatcagcatcttgctgca
gccattacaggcaacgaccatgagcctgaggtcgacccatacgcttttgttgacggagat
gttaagttcaccttctcggataagaaagacaaagcagggggagatagagaaccagggaag
aaacacaagggagaagatggcagtgctgctctatcagatgatgctcagcgggctgcggcc
aataaccgggccacttccaccagcctcatacatgattcagacctggcagtctccatcaaa
gacctggacaacctcttcaactcagatgaggatgaacaaacacctggagcacggagagct
gtaaatggagcagatgagaagtttggcagcaaggagtcgaagccagccacactggaccct
gtctcctgtataagcacggctgatctacaccagatgttccctacgcctccgtctctagag
cagcacatcatgggttactcccctatgaacatgggcagtaaagatggctgtatggagcct
ggctctggcctcaacactctggatggctctactgttctgggtggccagtttaaaatcgag
gtggaagagagtttctgcagccccaaaccttctgaaatcaaggacttctcatttgtgtac
aagcccgagttttgtcaaccgtttgtaggctgctccatgtttgcccccctgaagtctttg
cctagtcagtgcctgccccctatcaaactgcctgatgagtgtgtttacaggcccagctgg
actgtgggaaaactggagctactcaactctgtacctgctatgtcccttttcagcaaggat
ggtgaaaacaatgctatggagcaagagtacatccagacgtatacacccactcaaacccac
acgccattcttgtctaacagtgccccgcccagcaacagtggcgcaaacatcctcccgtcc
cctgccactcctcgtttttcagctcctacccctcgtaccccacggacaccccggacgccc
agaggcccagccagcgtacaaggttccctcaaatatgagaactcggacctgtactcgcca
gcctcaacaccctccacctgcaggccgctcaactctgtggaacctgcgacggttccctcc
atcccagaagcccacagcctatacgtcaacctcatcctgtcggagtctgtcatgaacctg
ttcaaggactgcaacttcgacagctgctgcatctgcgtatgcaacatgaacatcaaaggc
gccgacgtgggcatctacatcagcgaccccaacatggaggcccagtatccctgtgggtgc
ggcttcagtgccgttgtcaatcggcgctacggtaatggctccggcctcttcctggaagac
gagctggatatcatcggacggggttcggatgtgagccaggaggcggagaagcgctttgag
gtgttacggagcatgtcgctggagaagacagggggtggaggcaaggatcgagtcccggac
gagcttatctctctcctgcaggatcagtgcactaatcccttctcccccatcctggcattg
gaccccgagggattgtcttcccaagggccagggggcgccactgtaccaccatgtgtgcgt
gtagaggagagggacttccacaacgactgttacctggctctagaacacgggcggcagttc
atggacaacatgtccggtgggaaggttgacgagactctggtgaagagcacgtgtttacac
cattgggccaaacgcagcgcggtggatgtgagtgggctgtgctctcaggatgtgttgaga
gttcttctctctctccagcctgttctccaggatgccatccagaagaagaggaccgttcgc
tcctggggagtccaggggcctctcacatggcagcagtttcacaagatggctggaagaggg
tcttacggcacggatgagtctccggagcctctgcctattcctaccttcctggttgggtat
gagtatgactttgtggtgctatctccctttggcctgccgtactgggagaagctactgctt
gatccctttggctcccaaagagacgtaggatatctggtcctttgcccggacagcgatgct
ctcctcaccggagcaaagagcttcttcagagagttgacagcggtctacgagtcttgtaag
ctcggtcagcatcgaccaatctccaaagtgtatgctgatggcattgttagggtaggtgga
gctgctgccaagaagcactcagaacagccagtcaacgattggttcctgaaagcggctggt
ggcagcagtgatgcatttgccaagctcaagctgtttgcccaagtctgcagacatgacctc
gctccatacctcgctacacagctattggacagctccctcctcattcagccaaaccctatc
ccttcttcctcccaatcatcttcctcgcaatcctcctccaacttacaaacctcaacagcc
tccggaggctccgccctcaataacaacagcgctgccagcaacagtggctcaggcctgtca
ggcaacaccaataacacctcctcctcctcctcaggccctcagggcagcagcatccagtct
gccaagcccagctcgttccctccctatggaagtatgggagtccaaggtaacagctcccag
tctggggctctgggccagcaggctgtcacccagaactcgagcctctctggagacaattca
gccgtcaacagccagactcaggggccatctgaaccaccagagagcactatggagagagaa
aaggtcggagttcccacagacggcgagtcccatgccatcacgtacccacctgccatcatg
atttatgttgtggaccccttctcatacgaggaggcggagccagggacgtcacaatcaagc
atgtggacgatgggactcctccgctgctacctggagatgctgcaggtgctaccagctcat
atacgcaactctgtgtttgtacagattgtccccagtcagtacctgcttcaacctgtgagg
agtgaggagaggcacctctacgcccaacacctcaagtctctagccttctctgtcttcacc
cagtgcagaagacccctcccaacctccaccaatgtgaagtcactgacgggtttcggcccc
ggccttgccctcgacacctccctcaggaacccagatagacccgagtgtctgcgattgtac
acgccacctttcatcctggccccaacgaaagacaagcaaacagagttgggcgagactttc
ggagaggcgtctcagaagtataacgtcctttttgtgggctactgcctgtcacatgatcaa
agatggctgttggccacctgcacggacctgtacggagagctgctggaaacctgtatcatc
agcatagacgtacccaacagagcaagaaggaaaaagggatctgcccggaagctgggccta
cagaagctttgggagtggtgcctgggtttggttcagatgacatcattaccatggagagtg
gtgattggccgacttggacgaataggtcatggagagttgcgagactggagtattttactg
agcagaaggaatctgcagtcagtgtctcggaggctaaaggagaactgtaggctgtgtggg
atctcagcagctgacactcccagcatccttagcgcctgcctagttgccatggaaccccag
ggctcatttgtcatcatgccagactctgtgtcaacaggttcggtgtttggtcgaagtaca
actctgaacatgcagacgtcccagctgagcaccccgcaggacacgtcttgcacacacatc
ctggtgttccccacctctgcctttgtgcaagtcaacagctccaactacccgcacgaaaac
attgaccttgccttcaacggcggcaatgatggatcggatccaatcggtggcatctttgac
ctcctggagcaggaaggtaacgacctggttgattctgacatcataaacatcctccctgcc
tcacccactacgtcaccagttcactcacctggatcccagtacccccatggaggagatggg
agcaagggtcaaagtacagatcgtatggagtctcacgaagaagctcccaatatcctccag
cagccgttagctctgggctattttgtgtccaccgctaaagcaggtccactgcctgactgg
ttctggtccgcatgtcctcaggcacagaaccagtgtccccttttcttaaaggcctctcta
cacctccatgtgtcttcagtgcaatcggatgaacttttgcacagcaaacactctcacccg
ctggactccaatcagacctctgatgttctcagatttgttttggagcagtacaacgccctt
tcctggctgacctgtgaccctgcgacccaggaccgccgctcttgcctgcccatccatttt
gtggtgctcaatcaaatgtacaacttcatcatgaccatgttgtaa
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integrated database retrieval system
