Rhinichthys klamathensis goyatoka (western speckled dace): 130082809
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Entry
130082809 CDS
T09701
Symbol
tmtops3b
Name
(RefSeq) LOW QUALITY PROTEIN: teleost multiple tissue opsin 3b
KO
K04256
c-opsin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130082809 (tmtops3b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rkg04030
]
130082809 (tmtops3b)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130082809 (tmtops3b)
G protein-coupled receptors [BR:
rkg04030
]
Rhodopsin family
Vision
Opsin
130082809 (tmtops3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
130082809
NCBI-ProteinID:
XP_056103660
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MLKLLHSSIQVCSIQSTMVTVVRYCMFLRESSENGSQLDTPTPDQPGFSRTGHTVVAVCL
GIIFVFGFLNNFLVLLVFARFHVLRTPINLILLNICVSDMLVCIFGTPLSFAASVYGRWL
TGVHGCRWYGFANAMFGIVSLVSLAVLSYERYSTILCCTKVDVSDYRKAWLFITGCWLYS
LAWTSPPLFGWSSYGPEGPGTICSVQWNHRSPETTSYVICLFVFCLLLPLLLMVYCYGKI
LIAIHGVAKINQTAAQRRETHVLVMVVSMVSCYLLCWMPYGVMALLGTFSVGIVSPTASV
VSSILAKSSTVLNPIVYVLFNNQFYRCFIALVRCGPEPPAHLTLHTEEGGGQQDCIPMGS
YGITQMASPPLSPPDSPDKFGTPTMTQRASLQRRGNKTLVPVVHCSP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcttctccattccagcatacaggtgtgctctattcagtctactatggttact
gtcgtccgctattgtatgttcctcagagagtcctcagagaacggcagccagctggacaca
ccgactccagatcagcccggattcagccgcacgggacacactgtagtggcagtgtgtttg
ggaataatcttcgttttcggtttcctaaataactttcttgttcttttggtctttgcccgc
tttcatgtcctgaggactcctataaatttgatactgctgaacatctgtgtgagcgacatg
cttgtttgtatttttggcacaccgttaagtttcgccgcgtctgtatacggccggtggctg
acgggagttcatggttgcaggtggtatggttttgccaatgcaatgttcggtattgtttca
ctggtatcactcgctgtactgtcatacgagcgttacagcaccatcctctgctgcacaaaa
gtggatgtgtctgactataggaaggcctggctcttcatcacaggctgctggctgtactct
ctcgcgtggacatcgccaccactcttcggctggagcagttacggtcctgagggtcccggc
accatctgttcagtccagtggaaccatcgctccccagaaacgacttcttacgtcatctgc
ctctttgtcttttgcctgctcctgcctcttcttctcatggtctactgctacgggaagatc
ctcattgccattcatggggttgctaagatcaatcagacagctgcgcagaggagggaaaca
catgtgctggtgatggtggtttccatggtgtcctgttacctgctctgttggatgccgtat
ggggtcatggcattgcttggcacattcagcgttggcattgtcagccccacagccagcgtt
gtgtcgtccatactagcaaagagcagcactgttttgaatcccatcgtctacgttctgttc
aataatcagttctacaggtgctttatagctttagtaagatgtggtccagagcctccagcc
catctcacccttcacacagaagaaggtggtggtcaacaggactgcatccctatggggtca
tatggtatcacacagatggccagtccgcccctgtctccacctgatagcccagacaagttt
gggacccccacaatgacccaaagggcttcactacagagaagaggtaataagactttggtt
cctgtggtacactgttctccctaa
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