Rhinichthys klamathensis goyatoka (western speckled dace): 130082817
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Entry
130082817 CDS
T09701
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00562
Inositol phosphate metabolism
rkg01100
Metabolic pathways
rkg04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130082817 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
130082817 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130082817 (synj1)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
130082817 (synj1)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
130082817 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
130082817
NCBI-ProteinID:
XP_056103668
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRNREECLMFESGAVAVLSAAEKETIKAAYTKMLDAY
GILGVLRLNLGDSMLHSLVVATGCSSVGKVQDSEVFRVTGTDFVSLKNDPSDEDRIADVR
KILNSGNFYFAWSSTGVSLDLSLNAHRRIREDISDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFSALRRLYGKQVIIN
LLGMKEGEHMLSKAFQSHLNASEHAKAVRMLNFDYHQMVKGGKTEKLNTNLKPQISKFLE
ECGFFYYSGEAGIQRCQTGTIRSNCLDCLDRTNSVQAFIALEMLPKQLEDMGLTEKPQLV
ARFQEVFRSMWSTNGDSVSKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDVLRLGSTLNSDLADKARALLTTSSLYVSEPILQSASPRVLLGMCQNYYKYTRPKKIRV
CVGTWNVNGGKQFRSIAFRNHTLNDWLLDAPKKAGHPEFQDSKSNPVDIFAIGFEEMVEL
NAGNIVSASTTNQKLWAVELQKNLSRDQRYVLLASEQLVGVCLFVFIRPQHAPFIRDVAV
DTVKTGMGGATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKERNDDYNEIARKLTFPM
GRLLYSHDYVFWCGDFNYRINIPNEEVKELIRQQNWDSLIGGDQLVEQKNAGQVFKGFIE
GKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWKRRKWNFDKTAEELELNVVGAPVSE
EDQYPWSPGELKYYGRAELKTSDHRPVVAIIDMDVLEVDPEARHQVYKDVIALQGPPDGT
ILVSLCSSGPDDYFDDALIDDLLDRFAHFGEVILIRFVEEKMWVTFLEGYSALAALSLSA
STVNGKTIDIRLRSPGWIKSLEEEMSVERICGSIPVSTSSTLLAENSDIGEEYEMEGDVD
EEVEDILPQHLQPRASMDLGSSPNPSPRSSPCPSPTHGEPAPPIRPSRAPPRTAGPPQGG
LSPASIRREPAGSPVDGQPAGAPSSQGLEPKRAPPPRPNAPPARPAPPQRPPPPSGQKSP
ALARADAAGRGQATGSAPGGAPRPIPPRAGVISVPPQARPPPPAHPGAPRPIAEVHPGAP
RPSPDNHPGAPRPTAEPQSKPSELPLGPPSALPGPMRPQMISPMQPQSMSPVQPPVQAQL
PLPMQPTFPAPLMPQPAPQAPAGAAAAPQPGLASPKPPPRSRSAHALPPESAPPPPPTTQ
AKDMNGVQREAQWKLDPFDMLNNQSLFQNASFSAFLPRSSSSSTPSPSSSTSSSSTLPSS
LSLFSSPDTSNTPCLLSPPVTSRSKSQESLRSSPSPFLADAQPRPNSTNPFTGNLPSSPR
RSLTPDFYTQHQAQAGKPGLNRAMSAVVHSSTLPTSFSRQQSLVPATAAAPIKQTQKWVT
FDDDSDFLRNAPSAVGTGPPFIPAASSLPFPQPPGSFPSSGFDFLLRKAPSAVGTGPPLI
PAALSLPFPQPQSSFPSSGFDMDSNWVSLPTSTFPTIPPPIPTRTNTSIKNAHIPSRNEF
TER
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggcattcagtaaaggttatcgtatttatcataagctggatccacctccatacagtgtg
atcgtggagaccagaaatcgagaggaatgcctgatgtttgagtctggagctgtggctgta
ctgtccgcggcagagaaagagaccatcaaagcggcgtacaccaagatgctggatgcttat
ggaatactgggagttcttcgtcttaaccttggagattctatgctgcacagcctggtggtc
gcaacaggctgcagttcagttgggaaagtccaggattcagaagtttttcgggtaacgggc
acagacttcgtctctctgaagaatgacccctcagatgaggaccggatcgctgatgtcagg
aaaatcttaaactctgggaacttctattttgcctggtcctccactggagtaagtctagac
ctcagcttgaacgcacaccgcaggatcagagaagacatatctgacaatcgttttttctgg
aatcagtccctccatctccatctcaagcattatggggtgaactgtgatgactggctgctg
aggttgatgtgtggcggtgtggagatccgcaccatctacgctgggcacaaacaggccaaa
gcttgcgtgatctcacggctcagctcggagagagcaggcacacgtttcaatgtccgaggc
acaaatgacgacggccaggtggccaactttgtggagacagagcaggttattttccttgac
gacaaagtatcctccttcattcaaatccgagggtcaatacctctgttctgggagcagcca
ggaattcaggtgggatcccaccgtgttaagctgtcccgaggttttgaagcaaacgcacct
gcttttgagagacacttcagtgctctgaggaggctgtatggcaaacaggtgatcatcaac
ctgctgggtatgaaggagggggaacacatgctcagtaaagcattccagagtcacctgaac
gcttcggagcatgcaaaggctgtgagaatgttaaactttgactaccatcagatggttaaa
ggtgggaagactgaaaagctcaacactaacctgaaacctcagatcagcaagtttctggag
gaatgtggtttcttctactactcaggggaggccggcattcagagatgtcaaactggaact
attcgttccaattgcctggactgcttggaccgaacaaacagtgtccaggccttcattgca
cttgagatgcttccaaaacagttggaagacatgggtctgacggagaagcctcagctggtg
gctcgctttcaggaggtcttccgctctatgtggtccaccaatggagactccgtcagcaaa
atctacgcaggcactggcgctctggatggcaaggctaagggtggaaagctaaaagacggc
gctcgctcggtcaccagaaccattcagaacaacttctttgacagctctaaacaggaagcc
attgacgtcctgagactgggcagcaccctcaacagtgacctggcagataaagcacgagcc
cttctcacaaccagcagcctttatgtctctgagcccattttacagtcagcatctcccaga
gtgcttctgggcatgtgtcagaactactacaagtacacacgacccaagaagatcagagtg
tgtgtgggtacatggaacgtgaacgggggcaagcaattccgcagcattgcgtttcgtaac
cacacacttaatgattggttgttggatgctcctaagaaggccggacatccagaattccag
gatagcaaatccaaccccgtggacatctttgctatcggctttgaggaaatggtggagctg
aatgctggcaatattgtcagcgcaagcaccactaatcagaagctgtgggctgtagaactg
cagaagaacctctcacgagatcaaagatacgtgctgctggcctcagagcagctggtgggt
gtgtgtctgttcgtcttcatacgccctcagcatgcaccgttcatcagggacgttgctgtc
gatacagtgaagactggcatgggcggggccactggtaataaaggaggagtggctattcgc
atgctcttccacacaactagcatctgcttcgtgtgctcacattttgccgctggccagtca
caggtcaaagagaggaacgacgactacaatgaaattgcacgcaaactgaccttccctatg
ggtcgtctcctttactcccatgattatgtattctggtgtggagatttcaactaccgaata
aatattcctaatgaagaggtgaaggagctgatcagacagcagaattgggattcactgatc
ggtggagatcaactggtggagcagaagaatgctggacaggttttcaaaggctttattgaa
gggaagctggattttgcccccacttacaaatatgacctgttttcggaggactacgacacc
agtgagaagtgccgcacaccggcctggactgaccgtgtgctgtggaagagaagaaagtgg
aactttgataaaactgcggaagaattggagttgaatgtagtaggagccccagtgagtgag
gaagatcagtacccatggagccctggagagctcaagtactatggtagagcagagctcaaa
acctctgatcacaggcctgtggtggccatcatagacatggacgtgcttgaggtggaccca
gaggccagacatcaggtgtataaggacgtgatcgccctacagggtccacctgatggaacc
atcctcgtctctctctgctcttctggtcctgatgactactttgatgatgctttgatcgac
gacctgttggacaggtttgctcattttggcgaggttattcttatcaggtttgttgaagag
aaaatgtgggtgacgtttttggagggatactcggcactggcagctctgtctttgagtgcc
tctactgtgaatggaaagaccatagacatccgtctgaggagtcctggttggataaagagt
ctagaggaagaaatgagtgtggagagaatctgcggcagcatcccagtgtccaccagctcc
actctgctggcagaaaactctgacattggagaagagtatgaaatggaaggtgatgtggac
gaggaggttgaggatatcttgccccagcacctgcagcctagagcgagcatggatctaggc
tcgtccccaaacccatccccacgcagcagcccctgcccctctcctacccatggagagcct
gcgccccccatccggcccagcagagcccccccgcgcacagctggaccaccacagggagga
ttaagcccagcatccattagaagggaaccggcaggttctccggttgatggtcagccagct
ggagctccttcatcacaggggctagagccaaaacgcgcccctcctccacgccccaatgcc
ccaccagcccgacctgcacctccacagcgcccaccgccaccctcaggacaaaaaagccca
gcattagcacgtgcagatgcagctggtcgaggtcaagcaactggatcagcccctggaggc
gccccaaggccgattccacctcgagcaggagttatcagtgtccctcctcaggctagacct
cctcctcctgctcatcccggagcccccagacccatagcagaggtgcatcctggggcccct
cgaccttcacctgataatcaccccggagcaccaagacccactgctgaaccccaaagcaag
ccatccgagctccctctgggtccaccttccgcactgccaggtcccatgagacctcagatg
atatcacccatgcagcctcagtctatgtcaccagtgcagcctcctgtccaagcccagctc
cctctaccaatgcagcccacttttcctgcccctctgatgcctcagccggccccccaagca
cctgctggagccgctgccgcccctcagcccggactggcatcacccaagcctccaccccgg
agccggtccgcacacgcactgccacctgagtctgctcctcctcctcctcctacaacccag
gccaaggacatgaatggagtccaaagagaagcacaatggaaactagaccccttcgacatg
cttaacaaccagtccctcttccagaacgcatcattctccgctttcctccctcgctcctca
tcctcatccaccccctccccttcttcttccacctcttcttcctctacgttacccagctcc
ctctccctattctcgtctccggacaccagcaacactccatgtctcctgtctccacccgtc
acctcacgcagcaaatcccaggagtccctccgttcatcccccagtccgttcctcgcagac
gcccaacccagacccaacagcacaaaccctttcaccggcaacctgccgtcctcccctcgc
cgatcactcacacccgatttctacacccagcatcaggcccaagcgggcaaacctggcctg
aacagggccatgtcggctgtggttcacagttccactcttccaacatctttctccagacaa
caatccttagttcccgctacagcagcagccccaatcaaacagacccaaaagtgggtcacc
tttgatgacgattcagactttttaagaaacgctccatccgcagttgggaccggcccgcca
tttatacctgcagcctcatcccttcccttcccacaacccccgggcagcttccccagctca
ggctttgacttccttttaagaaaggctccatctgcagttgggaccggcccgccacttata
cccgcagccttatcccttcccttcccacaaccccagagcagcttccccagctcaggcttt
gacatggacagcaactgggtgtcgcttcccacctctacgttccccacaatcccccctccg
atcccaaccaggactaataccagcatcaaaaacgcccacatcccttccagaaacgaattt
acagagagatga
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integrated database retrieval system
