Rhinichthys klamathensis goyatoka (western speckled dace): 130082908
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Entry
130082908 CDS
T09701
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130082908 (gigyf1b)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130082908 (gigyf1b)
Surveillance factors
Other surveillance factors
130082908 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
130082908
NCBI-ProteinID:
XP_056103801
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSVTSPPPSPAMPKSKLADYRYGREEMLALYVKDNKIPEDM
QDKEFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAVPTGVARGRGS
TRGGRGRGRGEGVFYQRSVDEEVGFGRGREMHRSQSWDDRGERRFEKPLRREGGRGGFEE
GGAVSRKDYTRSDSDNWRTLREEAEEDDGTDPGGSWRIAGCRREDGGPRSAGWRDHASGD
GRRRKFDFDFRDGEGGRRRAGSEGGEEDRDGLPEWCTDEEEGEMGTFDSSGAFMCIKKSS
RDPIPEDQELEFEALEEEDESSQEKTDSPADKPEECEATAVWDGDRKSSSPHAVSAPAPV
HPSEQETPKPIAPPPFKPAPQPAKDAALVGTTPQMKSSFPPSNTGSDRPTVGGDTEEEDG
MKHLQQEAEKMVASLQDTSLEEECFTQALQESHINVAHTHNHPNPHTHSHSTPHTLPHSA
SALPLSHESAMKWFYKDPQGEIQGPFTTVEMCEWYQAGYFAINLLVKRGCDEGFQPLGEV
IKMWGRVPFSPGPSPPPLLGNMDQELLKKQLEQAATAALYQQLQMRFQHINRCGETGMPA
MNRSMSVPDTGPLWDMPTSVSQQSGGETSLWDLTMGNSTQGPTLEHLQKIQQERREAELR
VKREEEERKRREEKRRQQEEQKRREEEDLYRRKQQCRQQQELIMKFLQQSQQQSMSGGTG
WSGSQAGALSLGKASGKSLGLLELEAERLLKQQQQQRAQQRHGGLTMGQWSDGPAGMWSG
SSMEGKVGGGNPAMGMWDEAMKNQASHRNIGLKNSRSSPSLSDQYLLNRRKRTDDEDRLL
KLLQGMKPQDGFTTWCEQMLHALNSSANNSSSLDVPTIVAYLKEVESPYEVNDFIRIYLG
DTIEAKEFAKQFLERRAKQKANHQRQQQQLSKEVSGLNMNFPLQSMFQAAHMSKGSSVFD
TQGGKAKKKPSMMLHTDPSILGYSFLGGGELEQVEDY
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggtccagaatggctgcgtgcactatcaagagggggg
agtgtgacgtcccctcccccttctcctgcaatgccaaagtccaagttggccgactaccgc
tatggccgcgaggagatgttagcactttatgtcaaagataacaagatccctgaggacatg
caggataaggagtttgctgctatcctgcaggatgagcctcagcaaccgttggccttggtt
cccctgactgaggaggaacagagaaacttctccatgtccgtgaacagtgtggctgtgcta
aggcttatgggtaaaggaggcggcgctgtaccaacaggtgtagctagagggcgtggaagc
actcgaggaggtcgagggagaggcagaggagaaggcgtattctaccaaagaagtgtggat
gaagaggttgggtttggccgaggacgagagatgcaccgcagccagagctgggatgacaga
ggcgagcggcgctttgagaagcccttgaggcgtgaaggtgggcgtggtggatttgaggag
ggcggagcagtaagcaggaaggactatacacgctcagacagcgataactggcggacgctc
agagaggaggcggaggaagatgatgggacagatcctgggggaagctggaggattgccgga
tgtcgtcgtgaagacgggggtcctcgttccgcaggttggcgggatcatgccagtggggac
ggccgtcgtaggaagtttgactttgacttccgagatggagaaggtggacggagaagggct
ggaagtgagggaggagaggaagatcgagatggcctgcctgagtggtgcactgatgaagaa
gagggggagatgggaacctttgattcttctggggccttcatgtgcatcaagaaaagctcc
agagatccaatccccgaagaccaggaactggaatttgaggctctggaggaggaagatgag
agtagtcaggagaagacagacagccctgctgataaacctgaagagtgtgaggcaacagct
gtgtgggatggagacaggaagtcatcatctcctcatgctgtgtctgctcctgctcctgtg
cacccttcagagcaagagactcccaaacccatagcccctcctcccttcaaacctgcaccc
cagccagctaaagatgcagctttagttggcaccacacctcagatgaagagctcctttcct
ccctcaaacactggttctgaccgtccaacagttgggggagacaccgaggaggaagatggc
atgaagcaccttcagcaggaggctgagaagatggtggcgtctctgcaagacacgtccctt
gaagaggaatgtttcactcaagctcttcaggagagccacatcaacgtggcacacactcac
aatcacccgaatccccacacacactctcactcaaccccacacactctcccgcactccgct
agcgctctgcccctttcccacgaatccgcaatgaagtggttctacaaagaccctcaaggg
gagattcaaggtccattcactacagtggagatgtgtgagtggtatcaagcggggtatttc
gccattaacctgctagtcaaacgtggctgtgatgagggatttcagcccttgggcgaagtt
atcaagatgtggggacgtgtgcctttctctcctggcccctcccctcctccgcttctgggg
aacatggaccaggagctgttaaagaaacaattagaacaagctgccactgcagccctgtac
caacaacttcagatgagatttcagcacattaaccggtgtggggagactgggatgcctgcg
atgaacaggtccatgtcagtgccagacaccgggcccttgtgggacatgcctacctcagtc
tctcagcagtcaggcggtgagaccagtctgtgggacttaaccatgggtaactccactcag
ggtccaactcttgaacatttgcagaaaatccagcaggagaggcgtgaagctgaactcagg
gtgaagcgtgaagaagaggagaggaaacggagggaggaaaagcgccggcagcaggaggaa
cagaagaggagagaggaggaggacctttatagacgaaaacagcagtgccgtcagcagcag
gagttgatcatgaagtttctgcagcagagccagcagcagagcatgtcagggggcacaggg
tggagtggaagccaggcaggagctctctctctgggcaaagcttcaggaaagagcttggga
ctcctggagttggaggcagagagacttctcaaacagcagcagcagcagagagcacagcaa
aggcatggaggtttgacaatgggtcagtggagtgatgggccagctgggatgtggtcagga
tctagtatggaagggaaggtcggaggcggaaaccctgctatgggcatgtgggacgaggcc
atgaagaaccaggccagccatcgcaacattggcctgaagaacagccgcagcagtccctct
ctcagtgaccagtacttgcttaatcggcgtaagcgtactgatgacgaggacaggcttctg
aagcttcttcaagggatgaaacctcaggatgggttcaccacttggtgtgaacagatgctt
catgctctcaacagttctgcaaataactcctcttcactagatgtgcccaccattgtggca
tatctgaaggaagtagagtctccgtatgaagttaatgactttatccgcatttatctgggc
gataccattgaagccaaagagtttgccaagcagttcctggagcgccgtgccaaacagaaa
gcaaaccaccagagacaacagcagcagctgtccaaggaagtctctggattgaacatgaac
ttccccctgcagtcaatgttccaggcagctcacatgagtaagggcagcagtgtgtttgac
actcagggaggaaaagcgaagaaaaagcctagcatgatgctccacactgaccccagtatc
ctcggctactcattcctggggggaggtgagctggagcaggtggaggattactga
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