KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130082939
Entry
130082939         CDS       T09701                                 
Symbol
fbxw11b
Name
(RefSeq) F-box and WD repeat domain-containing 11-B isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04114  Oocyte meiosis
rkg04120  Ubiquitin mediated proteolysis
rkg04218  Cellular senescence
rkg04310  Wnt signaling pathway
rkg04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130082939 (fbxw11b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    130082939 (fbxw11b)
   04340 Hedgehog signaling pathway
    130082939 (fbxw11b)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    130082939 (fbxw11b)
   04218 Cellular senescence
    130082939 (fbxw11b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130082939 (fbxw11b)
   03036 Chromosome and associated proteins [BR:rkg03036]
    130082939 (fbxw11b)
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     130082939 (fbxw11b)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130082939 (fbxw11b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_VPS8 PEP5_VPS11_N WD40_2 DUF1513 DUF4508
Other DBs
NCBI-GeneID: 130082939
NCBI-ProteinID: XP_056103853
LinkDB
Position
Unknown
AA seq 531 aa
MEPEMEDKTLELMNTSVMDSQTADRSPKITIFKPIFICPQVSNGPLTGSRKRPSEGNYEK
EKDVCIQLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHI
AENILSFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYL
FKNRTTEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDE
KIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGE
VLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF
DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE
CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH
SGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaaccttagagctaatgaacacctctgtcatggactcg
cagactgcagaccgctccccaaagatcacaatttttaagcctatctttatctgtcctcag
gtgagtaatggacctttgacgggctctaggaagcggccatcggaaggaaattacgagaag
gagaaggacgtgtgtatccagctctttgatcagtggtctgaagcggaccaggtggagttt
gtggaacacctgatctcacgcatgtgccattaccaacacggccacataaactcctacctc
aaacccatgctccaaagggacttcattacggcactgccagctcagggtctggatcatata
gcggagaatatcttgtccttcctggacgcacgctcgctgtgttcggccgagctggtgtgt
aaggagtggcagcgtgtgatttctgaaggcatgttgtggaagaagctgatcgagaggatg
gttcggacagacccgctgtggaaaggcctttcagagagacaccagtgggaaaaatacctg
ttcaagaaccgcacaacagaagttcctccgaactcatactaccgttctctttatccgaaa
atcattcaggacatcgagaccatcgaggcgaactggaggtgtggccgacataacttgcaa
aggatccagtgtaggtcggagaacagcaaaggtgtttactgcctccagtatgacgatgaa
aagatcatcagcggtctacgagataactccatcaagatatgggataaacagactctggag
tgtttgaagatcctgacagggcacacaggctctgtgctgtgtctgcaatacgatgagaga
gtcattgttaccggctcctctgattccactgtcagagtttgggatgtgaactcgggggag
gttttgaacactctgatccatcacaacgaggccgtgctccacctgcgattctgtaacggg
ttgatggtcacctgctcgaaggatcgctccatcgccgtgtgggacatggcctctcccaca
gacatcagtctccgccgagtcctcgtcggacacagggccgccgtcaatgtggtcgacttt
gacgacaagtacattgtttctgcctctggtgatcggaccataaaggtgtggagtacaagc
acctgtgagtttgttcggacactaaacggtcataagcgaggaatcgcctgcctacagtac
agagacagactcgtggtcagtggctcctcagacaacaccatcaggctgtgggatattgag
tgtggagcctgtttgcgggttttggaagggcatgaggagcttgttcgctgtattcggttt
gataacaagcggattgtgagtggagcgtatgacggtaaaattaaagtatgggacctacaa
gctgctctcgatccacgagccccagccagcactctgtgtctacgtacactagtggaacat
tctggccgagtgttccggctccaattcgatgagttccagatcatcagcagctcccacgat
gacactatccttatctgggacttcctcaacgtgtcaaccaatgggcagacggaaggacga
tcgccgtcccgcacgtatacctacatatccagatag

DBGET integrated database retrieval system