Rhinichthys klamathensis goyatoka (western speckled dace): 130082941
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Entry
130082941 CDS
T09701
Symbol
etf1b
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1b isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130082941 (etf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130082941 (etf1b)
03012 Translation factors [BR:
rkg03012
]
130082941 (etf1b)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130082941 (etf1b)
Translation factors [BR:
rkg03012
]
Eukaryotic type
Release factors
130082941 (etf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
130082941
NCBI-ProteinID:
XP_056103857
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGENTTPENDEKTLYLTPEQEKDKS
HFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
RVDFQGMEYQGEDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcagcggacaggaacgtggaaatttggaagattaagaagttg
atcaaaagccttgaggcggccaggggaaatggcaccagtatgatatccctcatcatccca
cccaaggatcagatttcgcgtgttgctaagatgttggccgatgagttcggcacggcttcg
aacatcaagagcagagtcaacagactgtctgttctaggagccattacctccgtacagcag
agactcaaactctacaacaaagtgcctcctaatggcctggtggtgtattgtggcaccatt
gtgactgaggaaggcaaagagaagaaagtaaacattgattttgagccttttaaaccaatc
aacacatccttgtatttatgtgacaacaagttccatactgaggccctaactgctctgctg
tcagatgacagcaagtttggcttcattgtgattgatggtagtggtgccctgtttgggact
ttacaaggcaacacaagggaggtgctgcacaaatttaccgtggacctgcccaaaaaacat
ggtagaggaggacagtccgctcttcgatttgcacgtttgaggatggagaagagacataac
tatgtgcgtaaggtagcggagactgctgtgcaactcttcgtgtccaatgacaaggtcaac
gtggcaggactggttcttgccggatcagccgacttcaagacggagctcagccagtcagac
atgtttgatccaaggttacaagcaaaggttctcaagctggttgacatatcatatggagga
gaaaacggtttcaaccaggccattgagctctcagcggaagtgctctccaatgtcaagttc
atccaagaaaagaaactaataggacgatattttgatgagatcagtcaggacacagggaag
tattgttttggagttgaagacacgctcaaagcgctggaaatgggagcggtggagatcctt
atagtttacgagaacctggacactatgcgttacgtcctacgttgtcatggagaaaatact
acaccagaaaatgatgaaaagacactctatctgacaccagaacaggagaaggacaagtct
catttcactgacaaagagactggtcaggagcatgagctgatcgagagcatgccactgctt
gagtggttcgccaataactacaagaagtttggggccacactggaaatagttacagacaaa
agtcaggagggctcacagtttgtgaaaggcttcggaggcatcggtggaatcttgaggtac
cgggtggatttccaaggcatggagtaccagggagaggatgatgagttctttgatttagat
gactactag
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