Rhinichthys klamathensis goyatoka (western speckled dace): 130083024
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Entry
130083024 CDS
T09701
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130083024 (cilp)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
130083024 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarbopepD_reg_2
ig
CarboxypepD_reg
TSP_1
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
130083024
NCBI-ProteinID:
XP_056103963
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MGCLSAWTFLLFLLEITGTFSQGTWRNIMGTSWRPNPAVYHNEDNYEWTTWFNVDHPGGK
GDYEKLNAIRFYYRARVCEVPRALEARTTEWIPARSTGERVHADPVVGFWCVNDEQPVGR
NCSNYAVRFLCPRNIVSDNEELIWGPWSDWSVCPAQCNQVATQHRSRSCKSNSKQCNGQT
VEARSCQGPPCPRCDLQCMMGKVNDECDGCMCQDHTVLGSVRSAGGLPAPGAAILRAGSR
PKLLTVTDHNGHFQVPGICPDGNSTLMIKLNNHAPHQVTVPASTERTSVLLLKLERAKKL
YVLKNPENKARREGQTAAFCCKVDGTPEPNQYEWFHNGTLLDRSKYQYDETLVLRNLSLD
HIGEYYCRASNENGAIKSKPATLTVIGQKEPSCNPKPDSHLIRLPHDCFQNETNSLYYDV
GRCPTSTCTGKLDNGIRCKDSVSYCCGISNMEEKEIKCQGYQLPIMVVTQCGCKTCVDTK
AIIRGRAIAADTDEPMRFGHIYMDGTRISRTGYKGTFSIQVPTNTERLVLTFVDNMQKFV
NTTKVLPFNPKGGAVFYEIKLLRKKPAVTISSRETNKLDLGEVEGQDPIAEIEIPPNAFY
KENGEVFMGNVKASVTFLDPRDVSTAAAAQSDLNFIGDEGDTLPLRTYGMFSVDFRDEEG
GEPLNAGEVKVRLDAAQVKMPEHLKTMKLWSLNPETGLWEEEGQFYAEKKQRGKREERTF
LIGNMEIRERRLFNLDVPENRRCYVKVRAFRSDRYMPSEQVEGVVMTLINMEPTPGFSTN
PRAWGRFDSVITGPNGACLPAFCDEQKADAYSAYIMANLGGEELEAVASSPKLNPNIIGV
PQPYLNKLNYRRTDHDDRRIKKTAFSMNVAKPRSNTAEEANGPVYPFDKLKECEEAPFSA
AHFRFSRVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKLNSPHEINVR
SRNMGGTHPKTVGQLYGIRDTRSIRDMDQSTVSAVCLEFKCSGMLYDQDRVDRTLVKVMP
QGSCKRDSVNSMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKE
IALGRCFDGTSDGTSRVMKSNEGVALTFTCGDKEVTRQSMFQQMQNSLGQATAGSARQGR
GNRRQRGGSAAPRSSKRSTRNSYTRAQTVG
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctctcagcatggacctttcttctgtttctgttggaaattacaggcactttt
tctcaagggacatggagaaacataatggggacatcatggagaccaaacccagctgtgtac
cataatgaagataattacgagtggaccacatggttcaatgtagatcaccctggaggaaaa
ggagactatgagaagctgaatgccattcgtttttattatcgagcgcgtgtgtgtgaggtt
cctcgagctctagaggcacgcactaccgaatggatcccagctcgcagcactggggaaaga
gtacatgctgacccggttgtaggcttctggtgtgtcaatgatgaacagcctgttgggagg
aactgctcaaactatgctgtacgcttcctatgtcctagaaacattgtttcagataatgaa
gaactgatatggggtccatggtcagactggagtgtgtgtccagcccaatgcaatcaggtg
gcaacacagcatcgctctagaagctgcaaatccaattctaaacaatgcaatggccaaacg
gtcgaggccaggtcatgccaagggccaccttgcccacgctgtgatctgcagtgcatgatg
ggcaaagtaaacgatgagtgtgatggttgcatgtgccaggatcatacagttttaggatca
gtccgtagtgccgggggtctccctgcacctggagctgccattctccgtgctggttccagg
cctaaactcctcaccgttactgatcacaatgggcactttcaggtccctggaatctgccct
gatggcaacagtactctgatgatcaagctgaataatcatgctccacaccaagtcactgtg
ccagcaagcaccgaacgcacgtccgtcctccttttgaagctagagagagcaaaaaaactg
tatgtgctgaaaaaccctgagaacaaggccagaagggaaggtcagacagctgccttctgt
tgtaaggttgatgggacacctgaaccaaaccagtatgaatggttccacaatggcactctg
ctggacaggagtaaatatcagtatgacgagacactggttttgaggaatctcagtttggac
catattggagaatactactgcagagccagtaatgagaacggagccatcaaatccaaacca
gccaccctcacggttattggtcaaaaagaaccgtcatgcaaccctaagcctgattcccac
ctgatccgcctaccacatgactgctttcaaaacgagactaactctttgtattacgatgtg
gggagatgcccaacatccacatgcacagggaagctggataacggcatcagatgcaaagac
tcagtgtcctactgctgtggaatttcaaacatggaggagaaagagattaaatgtcaggga
tatcagttgcccatcatggtagtgactcagtgtggttgcaaaacatgtgtggacacaaaa
gctatcattcgtggacgtgctatcgcagcagacactgatgagcccatgaggtttggacac
atctacatggatggcacaagaataagtcgaactggatacaaaggcacattctcaatccag
gtaccaacaaacacagagcgtctagtcctcacatttgtggacaacatgcagaagtttgtg
aacaccacaaaagttttaccatttaatcctaaaggtggagctgtgttctatgagatcaag
ttattgaggaaaaagccagctgtgaccatcagctcaagggaaactaataagctagatctt
ggtgaggtagaaggccaggatcccattgctgagattgagatcccacccaatgcattctat
aaagaaaatggagaagtgttcatgggaaatgtcaaagccagtgtgactttcctcgacccc
agggatgtatcaacagcagcggctgcccaaagtgatctcaacttcattggtgatgaaggt
gacactctgcccttgaggacctatggaatgttctcagtggactttagggacgaagaagga
ggcgagccgctcaacgccggagaggtgaaagtgcgtctcgatgcagcacaagtgaagatg
cccgagcacttgaagaccatgaaattatggtctcttaatcctgagacaggtttgtgggag
gaagagggccagttctatgctgagaagaagcaaagggggaaaagagaggagaggaccttt
ctcataggtaacatggaaatccgtgagaggcggctatttaacttggatgtacctgagaac
agaagatgttacgtgaaagtgcgggctttccgtagcgaccggtacatgccaagtgagcaa
gttgaaggagtcgtgatgactttaataaatatggagcccacaccagggttttcaaccaac
cctcgggcttggggtagatttgacagtgtcatcactggcccaaatggtgcgtgccttcca
gctttctgtgatgaacagaaagcagatgcatattcggcctacatcatggccaaccttggg
ggagaagagctagaggctgtagcatcctctccaaagttgaatcctaacataattggcgtc
ccacaaccctatttgaataaacttaactatagacgtacggaccacgatgatcgcagaata
aaaaagacagcattcagcatgaatgtggccaaaccccggtcaaacacggctgaggaggcc
aatggtccagtttatccatttgacaagcttaaagagtgtgaggaagctccattcagcgca
gctcacttccgcttctcgagagttgaaggagatcggtatgattacaacacagtgcctttc
aatgaggacgatcctatgagctggactgaagactacttgagttggtggccaaagcccatg
gaatacagggcctgctacattaaagtaaaactcaacagtccccatgagatcaatgttcgt
tctcgcaatatgggaggtacccatccaaaaaccgttggccaactgtatggcatccgtgac
accagaagcatccgggacatggaccagtcaactgtttcagctgtgtgtctggagtttaag
tgcagtgggatgctctacgatcaagacagagtggatcggaccctcgtgaaggtaatgcct
cagggcagctgcaagcgagacagtgtaaacagcatgctacaggaatacttggtgaatcac
cttccactggctgtcaacaatgacacaaatgagttcaccatgcttgcacctctggaccct
ctgggccacaactacggtatctatacagtgactgaccaagacccccggacagccaaagaa
attgcgcttggccggtgctttgatggtacatcagatggcacctctcgagtcatgaagagc
aatgaaggtgtggcattaacattcacctgtggtgataaagaggtcactaggcagagtatg
ttccagcagatgcagaactcactgggtcaagccacagctggaagtgcacggcagggaaga
ggaaaccggaggcagagaggaggctcagcagcacctcgcagcagtaagaggagtactcgt
aattcctacacacgtgcccagaccgttggttga
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