Rhinichthys klamathensis goyatoka (western speckled dace): 130083094
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Entry
130083094 CDS
T09701
Symbol
tlr4al
Name
(RefSeq) toll-like receptor 4a, like
KO
K10160
toll-like receptor 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04145
Phagosome
rkg04217
Necroptosis
rkg04620
Toll-like receptor signaling pathway
rkg04621
NOD-like receptor signaling pathway
rkg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130083094 (tlr4al)
09143 Cell growth and death
04217 Necroptosis
130083094 (tlr4al)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130083094 (tlr4al)
04621 NOD-like receptor signaling pathway
130083094 (tlr4al)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130083094 (tlr4al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130083094 (tlr4al)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rkg04054
]
130083094 (tlr4al)
04090 CD molecules [BR:
rkg04090
]
130083094 (tlr4al)
00536 Glycosaminoglycan binding proteins [BR:
rkg00536
]
130083094 (tlr4al)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Toll-like receptors
130083094 (tlr4al)
Pattern recognition receptors [BR:
rkg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
130083094 (tlr4al)
CD molecules [BR:
rkg04090
]
Proteins
130083094 (tlr4al)
Glycosaminoglycan binding proteins [BR:
rkg00536
]
Hyaluronan
Cell surface receptors
130083094 (tlr4al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
LRR_6
TIR_2
LRR_14
LRR_9
LRR_5
LRR_LRWD1
LRR_R13L1-DRL21
Gly_transporter
ThsB_TIR
DUF4327
Motif
Other DBs
NCBI-GeneID:
130083094
NCBI-ProteinID:
XP_056104044
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MISNKAGSNLYERLRSLKMSFFTVSAFMIFFFIGAGESCTKITENLHYSCMGRNLSYIPP
TISPSVQILDFSFNVLKHLQKTVFPVLSFLRVLDLSRCQIKHIENDTFYNVKNLTTLILT
GNPIAYFGPGCLNSLHYLQRLVLVDVGLASLQLQMNNLTKLQELRVGTNNIQSVSLPPFM
SSFKDFSLLDLHANNISIIKTDHTVVLRKIGRNMTLILSRNPLLHIEPGAFKDVYLRELD
IRSAFVSFATQKVGLKALYGLNVKKLMFGKNRDDNKIFPSDSDYLDGLCSIYFHEVYYYI
KERPSGKINIFRCMINATIVAVKGGLIRDIAYVPFNEIKEIYLINNQLDTVPGKLLSHLH
TLEKVVFTRNVATQVETFIDMPKLQYLDLSSNQITLTSCCTEMLLDTHGIRYLNLSLNPQ
IGLSVPAFDRLDSLEILDFHHTRVVGMGYLSLLSNLKYLRYLDVSYSSITFGNIYCFYGL
SSLKVLKMAGNNFQGDVIRFLFNNLTVLEHLDMSYCRIVELHPSSLKNLQRLRLLNLRGN
NLMTIDFLIHPSLKQLTSFYVDKNSITSIPLHVLQKLPANLSEFDLSSNPIDCSCSQTDF
ILWIIQNQNILKQPENIFCKTLSTRSDFRAVDFDIDSCVQKKRLTIVLSLCFVSLVVVLS
VLAYRYQFYLQYCWILLRGYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIH
LCLHMRDFQAGKSIASNIIDEGIMGSRKVIVVVSQHFIDSAWCRFEFELAQSRFMMERNA
NIIIVILEDVEETKTKKVFGLHKHLKKNTYLKWSRAL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaaacaaggctggctcaaatttgtatgagcggttgagatcactcaagatgagt
ttctttactgtaagtgctttcatgatattttttttcataggtgctggagaatcatgcact
aaaattaccgagaatctgcactactcatgcatgggaagaaacctcagctacataccacca
actatttctccatcagttcaaattctggattttagttttaacgttttgaaacacttacag
aagacggtattcccggttttgtcttttctacgagtccttgatctgtcaagatgccagatc
aagcacattgaaaatgatactttctacaatgtgaagaatttgactacattgattctcact
ggaaacccaattgcatattttggacctggatgcttgaattctttacattatctacaaaga
ctagttcttgtggatgttggtctcgcgtccttacagcttcaaatgaataaccttactaag
ctacaggaacttagagttggaacaaataacatccagtccgtgtctctccctccattcatg
agctcctttaaagatttcagtttacttgatctacatgccaataatatatccatcattaaa
actgatcacactgttgtgttgagaaagattggcagaaacatgactttgattctctctagg
aatccattattacacattgaaccaggagctttcaaagatgtttatctcagagagctggat
attcgatctgcatttgtttcatttgctactcagaaagttggtctaaaagctctatatggt
cttaatgtcaaaaagctgatgttcggaaagaacagggatgataacaagattttcccatca
gattcagactatttagatggcctttgctctatttattttcatgaggtatattattacata
aaagaaaggcctagtgggaaaattaatatctttcgctgtatgattaatgccacaattgta
gctgtaaagggtggtctaattcgtgatattgcgtatgtgccatttaatgaaatcaaggag
atttacttgattaacaatcaattagatactgtgccaggtaaactactttcacatcttcat
actttagaaaaagtagtatttacacgcaacgttgcaacccaagttgaaacctttatagac
atgcctaagcttcagtatttggatctgagttcaaaccaaattacattaacatcatgctgc
acagaaatgttgttggacactcatggaatcaggtatctaaatttgagtttaaatccacaa
atcggtctttctgttccagcatttgatagacttgattcccttgaaattctagattttcat
catacaagggttgtaggtatgggatacctttcacttttgtctaacttgaagtatttgagg
tatctagatgtttcttattccagtatcacttttggtaacatatattgcttttatggactg
agcagtcttaaggttctcaagatggctggcaataattttcagggtgatgtaatacgattt
ttatttaataatctcacagttctagagcaccttgacatgtcatactgtcgtattgtagag
ttacacccaagctctttaaaaaatctccaaagacttagacttttgaatctgagaggaaac
aatttaatgactatagattttcttatccacccaagcctgaaacaattaacatcgttttat
gttgataaaaacagcattactagcatcccacttcatgttctccaaaagttgcctgcaaac
ctttcagagtttgatttgtcctccaaccccatcgattgttcctgctcccagacagatttt
attttgtggatcatccaaaatcaaaacattttgaagcaaccagaaaatattttctgcaaa
accttgtcaacacgctcagattttagagcagtggactttgacattgacagctgtgtgcaa
aagaaaagactcacaattgttttatcattatgttttgtttcattagtagttgtgttatca
gtcttggcttataggtaccagttttatcttcagtattgctggattcttctgagaggctac
agatcacctggacaacaagaatgttcctatgatgcatttgtgattttctccagctatgat
gaagtctgggtcatgaatgaactgatggagaatctggagaacggtgttccacctattcat
ctttgccttcacatgcgggactttcaagcagggaagtccatcgcctccaacattattgat
gaaggaataatgggcagtcgtaaagtcattgtggttgtgtctcaacacttcattgatagc
gcctggtgtcgctttgagtttgaattagctcagtcccggtttatgatggaacgcaatgcc
aacatcatcatcgtcattctggaagatgtggaagagacgaagactaagaaagtgtttggt
cttcataagcatctgaaaaagaacacgtacttgaagtggagcagggccctttga
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