Rhinichthys klamathensis goyatoka (western speckled dace): 130083119
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Entry
130083119 CDS
T09701
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130083119 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130083119 (kcnma1a)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130083119 (kcnma1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
130083119
NCBI-ProteinID:
XP_056104085
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MLVADGNGSYGSSSSRMSNTFNFNKNPDSSVSISKMDVIIPFSPDVPCDNNGQRMWWAFL
ASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKSKEAQKVNNPINIQADGTPKILNEKDE
APASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQPLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCGDPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLST
MLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLL
IAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITD
PKRIKKCGCKRIKEEVRATFQNPSIELANSMAVPNTLPSVLPVVGCSTTAVPLVNNRKGS
LLPPAPPSQSRLSLAGLNRARSLPGKYRYRYRPSTLSSTLVPTHFDDEHPSTLSPKKKQR
NGGMRNSPNCSPKMTRHDPLLIPGNEQIENMDANVKRYDSTGMFHWCPSKEIEKVILTRS
EASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVGSLDYLRREWE
TLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIK
SMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLVRQASVTTGSNIPIITELAKPGKL
LPLVSFSQEKNSGTNIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVL
DSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQL
ALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGAPSQCTKRYVITNPPYE
FELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSIPATNRQNRSSKARE
ARDKQNATRMNRMGPEKRWFTDEAENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIRE
VEDEC
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgctagtggcggatggcaacggatcctatggcagcagcagctctagaatgagcaatact
ttcaattttaataaaaatccggactcttctgtctctatatcgaagatggacgtgatcatt
ccattctcaccagacgttccctgtgacaacaatggtcagcggatgtggtgggctttcctt
gcctcatccatggtgacgttcttcgggggtctcttcatcatccttctgtggaggaccctc
aagtacctgtggactgtctgctgccattgcaacatcaaaagcaaggaggcacagaaggtg
aataaccctataaacattcaggctgatggcacaccgaagatcctgaatgaaaaggatgag
gccccagccagtgaggtgggctggatgacctcagtcaaagactgggcgggggtcatgatc
tccgcacagacccttaccggcagagttctggtggtgttggtctttgcactcagcatcgga
gctctgggaatatacttcatagattcttcagatcctatagaatcctgtcagaatttctac
aaagacttcacattacaaattgacatggcattcaatgtgttcttcttactctactttggc
ctgcgtttcatagcagccaatgataagctgtggttctggttggaggtgaactcagtggtg
gacttcttcaccgtaccgcccgtgtttgtgtcagtttatctgaacaggagctggttgggt
ctgaggtttctaagagccttgagattgatacagttctcagaaattttacagtttttgaat
atcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcaca
tggctcactgctgcaggattcattcatctggtggaaaactcaggggatccatgggaaaac
tttcaaaactctcaaccgctctcatattgggaatgtgtgtacttattaatggtcactatg
tccactgtgggatatggagacgtctatgcaagaaccactcttggacgccttttcatggtc
ttcttcattcttggtggtctggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatggcagaaagcatatt
gtggtctgtggtcatatcacgctcgaaagtgtttccaacttccttaaagacttcctacac
aaggacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccctaatctt
gagctggaagccttgttcaaacgtcacttcactcaggtggaattctatcaaggatctgtc
cttaacccacatgatctagcaagagtgaagatcgagtcagctgatgcctgcttgattctt
gcaaacaaatactgtggagaccctgatgctgaagatgcctctaatatcatgagagtaata
tctatcaagaactaccatccaaagatcagaataatcactcaaatgttgcaataccacaat
aaggcccatctgttaaacattcccagctggaactggaaggagggtgatgatgcgatctgc
ttggccgagttgaaggctggcttcatagcccagagttgcctggcacagggcctgtccact
atgctcgccaatctcttctccatgaggtcatacatcaagattgaggaggacacctggcag
aagtattatctggagggagtagctaatgaaatgtacaccgaatacctgtccagtgccttt
gtggggctttcatttcctacaatttgtgagctgtgctatgtcaagctcaagttgctgttg
attgctattgagtacaagtcagagcaaagggaaagcagaagcagaaagcgtattctcatc
aaccccggaaatcacgttaagatgcaagaggggacattgggattctttatcgccagtgac
gccaaagaggtgaaaagagcatttttctactgcaaagcatgtcatgatgacatcacagat
cccaaaaggattaaaaagtgtggctgcaagagaataaaggaggaagttagagcgactttt
caaaacccctcgatcgaactggccaacagcatggctgttcccaacactcttcccagtgtg
ctgccggttgtggggtgctccacgactgccgtccctcttgttaataaccgtaaaggaagt
ctgctccctccggcaccgccctcacagtcacgcctcagcctggctggactgaaccgggcc
cgcagcctgcccggaaaataccgctaccgctaccgccccagcaccttgtcctccacgctc
gtgcccacgcacttcgatgatgagcatccgtcaacactgtcacccaaaaagaagcaacgc
aacggaggcatgcgaaattcacccaactgctcacccaaaatgacgagacatgaccctctg
ctcattccgggaaacgagcagattgagaacatggatgctaatgtgaaaagatacgactct
actggaatgtttcactggtgtccatccaaagaaattgagaaggtcattctgacacgcagc
gaggcctccatgacggttttaagtggacatgtagtagtctgtatattcggagatgtcacg
tcagctttagtggggcttcgaaacttggtgatgcctttgagagcaagcaacttccattac
cacgagctaaagcccattgtgtttgtgggctcattagattatctgagaagagagtgggaa
acccttcacaacttccccaaagtctccatcttacctggtacgccattaagtcgagctgat
ttaagagccgtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaac
aatatcgacgatgcttcactgcaggacaaggaatgcatcttggcgtctcttaacatcaaa
tctatgcagtttgatgacagcattggggtcttgcaggctaattcccaaggtttcacacct
ccggggatggataggtcatctccagataacagtccagtgcacggcttagtgcggcaggca
tccgtcaccacgggatcaaacatcccgatcataactgaactcgctaagcctggcaaacta
ctgcctttggtttcattcagtcaggaaaaaaacagtggaaccaacatacaaatgataaca
gaactggtaaatgactccaacgttcagtttttggaccaagatgatgatgacgacccagat
acggagctgtatctgacccaaccgtttgcctgtggtactgccttcgccgtcagcgtgttg
gactccctgatgagtgcgacatacttcaatgataatatcctcaccctgatccggacgctg
gtcacgggaggcgccactccggagctggagggcctgttggctgaggagaacgcgctgaga
ggtggctacagcacgccacagacgctggctaacagggacaggtgtcgggtcgcccagctg
gccctatacgatgggcccttcgcagacttgggggatggtggttgctacggagacttattt
tgtaaagcattaaaaacgtacaacatgctgtgctttggaatctacagattgcgagatgca
catttaggtgcaccaagccagtgcacaaaaagatatgtcatcacaaacccgccttatgag
tttgagctggtgcccacggacctgatattctgtctgatgcagttcgaccacaacgcgggc
cagtcccgagcaagcctgtcccactcctcccattcctctcattcatccagcaagaagagt
tcgtctgttcactccatccccgccacgaaccgacagaaccgcagcagcaaagcacgtgaa
gcccgtgacaaacagaatgcaacaaggatgaatagaatgggcccagaaaagagatggttt
acagatgaagcagaaaatgcatacccaaggaacattcaaatcaagcccatgagcactcac
atggccaaccaagtcaatcagtacaaatccactagcagtctgattccacctattcgagaa
gttgaagatgaatgctga
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