Rhinichthys klamathensis goyatoka (western speckled dace): 130083178
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Entry
130083178 CDS
T09701
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130083178 (btaf1)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130083178 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_MROH2B_C
TOR1L1_N
HEAT_GCN1_C
Vac14_Fab1_bd
HEAT_2
HEAT_GCN1
HEAT_EZ
ARM_TBCD_2nd
Arm
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
130083178
NCBI-ProteinID:
XP_056104202
LinkDB
All DBs
Position
Unknown
AA seq
1861 aa
AA seq
DB search
MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLTFLRSPNWDTRI
AAGQAVEAIVKNIPEWNPTPKPKDEACPEDMSPEDISSDRLSFYRFDISRLLKHGASLLG
SAGVEFEVQDDKSGETDPKERLARQRKQLQKKLGLDMGAAIGMDTEELFNDEDLEDACAS
STNRTQPGKSLGCHFSRNHMPAAELIDSQFRPGMSNRQKNKAKRMAKLVAKQRSRDMDPN
EKSNDSFEGEPEEKRRKTTNVVIEQPATDSKLLIDNVPDNSSLFEETQEWPLESFCDELC
NDLFNPSWEIRHGAGTGLREVLKCHGAGGGKTVGSTVEQMERQHQEWLEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQTLGVALRHMANSGVAMTVDILLKLLTEDQWEVRHGGLL
GIKYVLAVRQDLIAALLPRVLPAITEGLRDLDDDVRAVAAAALIPVVDGLVQLQPAKVPF
IVDTLWNALLELDDLTASTNSIMTLLSSLLTYPQVRQCSSQQSLTVLVPRVWPFLRHTIA
SVRRAALETLYTLLSKADQSCAVWLNPIMQDMLRYIFQSCILESNQEILELIQKVWVELL
RQAPQQYVVAASCPWMGAWLCLMMQAPHIPIDPNMLLEVKARLKEKASGKTRQGSIQVKE
TVQEYIGGAETITEDPATRDYVVTRARLMAAKLLGALCNCICDPRLNSSSQELRPAESLA
QLLLFHLNSKSALQRIAVSMVICEWAGLQKECELLSSVVQPRLLTILSEQLYYDEIAIPF
TRMQNECKQLIALLADAQIDVGERINSAVFTIDQANELVTTIFSECTSSLNLKSRQFQPL
DGKRLQAHSTVCETSAEWQQLQLRVHTFTACAVVGLAMLPDKLNPLVRPLMEAARREENI
LVQGYAASNIARLLQLCSTRCPCPNAKIVKNLCSSVCVDPMLTPSAACPVPPASTPAIQE
SSKGSVAEKDAMHHMVNKTKGIITLYRHQKAAFAITSKRGPTPKAPKTNTNNDLPLGGSI
TTETDESKKPCLIQRRGAEFCLMTVARHFGQELTKSLPYLWEFMTVPLRNALNAQGFDSS
QLLKQGDSIAQELVNSLQVLEVTAGAMSQELIPVLMEQLPLLCTCLQHPYTAVRHMAARG
VGVLSKIATMETMNVFLEHVLPWLGAIDDNTKQEGAIEAMACVMEQLDVDIVPYIVLLVV
PVLGRMSDPCDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLEQLLD
GRKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDH
FLRAQEFTRTKAPDCCHLPSIVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARL
QHQVKKHNLIVASYDVVRNDIDFFRDIKFNYCILDEGHVIKNGKTKLSKAIKQLSANYRI
ILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAM
EALHRQVLPFLLRRMKDDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVDVDDVIS
TTSTQEEEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEYKHITEQLSSQHSNLRD
IQHAPKLSALKQLLLDCGLGSSGASDGCTEAVVAQHRVLIFCQLKSMLDIVEQDLLKTQL
PTISYLRLDGGVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWN
PMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTVISQENASLQSM
GTEQLLNLFTLDKDEAVKSEAGASSSGKTSMKSVLDGLGDLWDQQLYENEYDLDSFIHSL
K
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcaaggttggaacgtctatttatcttattggacacaggaacgactcctgtt
acccgtaaagcagctgctcagcagctgggagatgttgttaagcttcacccacatgagctt
aataacctgctatcaaaggttttaacattcttgaggagtccaaactgggatacgcgaatc
gcagctggacaggctgttgaagccatagtgaagaatattccggaatggaacccaactcca
aagccaaaagacgaggcgtgtccagaagatatgtctccagaggacatctcttcagacagg
ctgagtttctacaggtttgatatctcccgtctgctcaagcatggagcgtcgctgcttggc
tctgcaggagtggagtttgaggtgcaagatgacaagtcaggtgagacggatcccaaagag
cgtttggcccggcagagaaagcagttgcagaagaagttgggattggatatgggcgctgcg
atcggcatggacactgaggagctttttaatgatgaggacctggaggatgcttgtgcctcc
agtaccaacagaacacagcctggtaaaagcctaggctgtcacttctcacgcaaccacatg
ccagctgcagagctcatagattcacagtttcgtccaggcatgagcaatcgacagaagaac
aaggccaagaggatggcgaaactggtggcaaagcagagatccagagacatggatcctaat
gagaagagcaatgacagttttgagggagagccagaggagaaacgacggaaaaccacaaat
gtagtcattgagcagccagcaaccgacagcaaactcttaattgataatgtccctgataac
tccagtttatttgaggagactcaggaatggcccctggaaagcttctgtgatgaactgtgc
aatgacctcttcaacccctcatgggagattcgccacggtgccggcacaggactgagggag
gtgctgaagtgtcatggtgctggtggaggaaagactgttggcagtacagtagaacagatg
gagcgacagcaccaggagtggctggaggatttggtcatccggcttttgtgcgtcttcgct
ctggacagatttggagactttgtatcagatgaggtggttgcacctgtcagagagacgtgt
gcccagactcttggcgtggccttgaggcacatggcaaacagtggcgtcgccatgactgtg
gacattctgcttaagctgctaactgaagaccaatgggaggttcgacacggaggcctgctg
ggcatcaaatatgttcttgctgtcagacaggatttaatcgcagcgctcctgccccgggtt
cttcctgccattacagaaggcctgcgggatctggatgatgatgttcgagctgtggcagca
gcagctttgatccctgtggtggatggattggttcagttacagcctgctaaggttcccttc
atcgtggacacactgtggaatgctctgctggagctggacgatctcacagcctcaactaac
agcatcatgacccttctgtcctctttgctcacttacccacaggtccgccagtgcagctcg
caacagtctctgacagtgttggttcctcgagtgtggccgttcctcagacataccattgct
tctgttcgtcgggccgccctagaaaccctctacacactgctttccaaagctgaccagagt
tgtgcagtgtggctgaatcccatcatgcaggacatgttaaggtacatctttcagtcctgc
atcctggagagcaaccaagagatcctagagctgatacagaaggtgtgggtggagttgttg
cgacaggcgccgcagcagtatgtggtggcggccagctgtccttggatgggtgcctggctc
tgtttgatgatgcaagcgccacacatcccaatagaccctaacatgctgctggaagtgaaa
gcccgcttaaaggagaaggcttctgggaagacccggcagggatctattcaagtcaaggaa
acggtccaggaatacatcggtggagcagagacgattaccgaagaccctgccacacgggac
tatgtggtgacacgtgcacgtctaatggctgcaaagctgttgggggcgctgtgcaattgt
atatgtgacccacggttgaacagctcttctcaggaactccgtcctgccgagtctctagct
caacttttactattccatctcaattccaaatcggccctgcagcggattgctgtttctatg
gtgatctgtgagtgggcaggccttcagaaggagtgtgagctgttatccagcgtggttcag
ccccgattgctgaccatcctctcagaacaactctactatgatgagatcgccattcctttt
actcgcatgcagaacgaatgcaaacaactcatagcactgctggctgacgcccagattgac
gtgggagaacgaatcaactccgctgtgttcaccattgatcaggccaatgagctggtgacc
accatcttctcagagtgcacctcctctctgaacctcaagtcacgtcagttccagcctttg
gacggcaagaggctgcaagctcattccactgtgtgcgagaccagcgctgaatggcagcag
ctgcagctgagagttcataccttcactgcctgcgctgtggtgggactggccatgctgccg
gataaactgaatcctttggtcaggcccctgatggaggcggcccgccgcgaagagaacata
ctcgttcagggttacgcagcctccaacatcgctcgtctgctgcagctgtgctctaccaga
tgtccctgtcctaacgccaagatcgtgaagaatctctgcagctcagtgtgtgtagatccg
atgctcacccctagtgctgcctgtcctgtcccgccagccagcactccagcaatacaagag
agcagtaaagggtctgtggcagagaaggatgcaatgcatcatatggtgaacaagacaaag
ggcatcatcacgctttaccggcatcagaaagcagcttttgccatcaccagtaagagggga
cccacccccaaagcccccaaaaccaacaccaacaatgacttgcccctcggaggcagcatt
actacagaaacagacgagagcaagaagccatgtcttatccagaggagaggtgctgagttc
tgcttgatgacagtcgccaggcatttcggtcaggagttgacaaaatcattgccatatctg
tgggagttcatgaccgttccgctgagaaatgcgctgaatgctcagggatttgattccagc
cagttgttgaagcagggagattcgattgctcaggagcttgtgaactctctgcaggtgctg
gaggtcaccgcaggagccatgtcccaagagctcatccctgtattgatggagcagctgcct
ctgctgtgcacctgtctgcagcatccatacacagccgtgcgtcacatggccgctcgcggt
gtgggcgtgctcagcaagatcgctactatggagaccatgaatgtgtttctggaacatgtg
ctgccctggttgggtgccatcgatgacaacaccaagcaggagggagccatcgaagccatg
gcctgtgtgatggaacagttggatgtggatattgtgccctacattgtgctgctggtggtc
cctgtgttgggccgtatgagtgacccctgtgacagcgtgcgattcatggccacacaatgc
tttgctactctgatccgactgcttcctcttgaggctggaatcccagacccgccatcgatg
tctgaagatctaattcggcagaaggccagagaacgacacttcctcgagcagctgctggat
ggaaggaaactggaaaattacaagattcctgtgcccatcaaagcagagctcaggaaatac
caacaggatggtgtcaactggctggcatttttaaacaagtacaagcttcacgggatcttg
tgtgatgatatgggtctgggtaaaaccttgcagtccatctgtattctggctggggatcat
ttcctcagggctcaggagttcaccaggacaaaggctcctgactgttgccatttgccctcc
atagtggtgtgtccccccaccctgacaggccactgggtggatgaggttgggaagttttgc
tctaaagagtatctgaatcctctgcactatactggcccccccactgaaagagcacggttg
cagcaccaggtgaagaaacacaatctcattgttgcctcgtatgatgtcgttaggaatgac
attgactttttcagggatattaaattcaattactgcatccttgacgagggtcacgtcatt
aagaatggaaagaccaaactctccaaagcgatcaagcagttatctgccaactacaggata
attctctcaggaacgcccattcagaacaatgttctggagttgtggtctctctttgacttc
ctgatgccaggctttcttggtactgaacgtcagtttgctgcccgctatgggaagcccatc
cttgccagtcgagatgctaaaagttcctcacgtgagcaggaagcaggtgtgctggcaatg
gaagcactccatagacaggttctgcccttcctcctgaggagaatgaaggatgatgtgctt
caagatctgccacccaagatcatacaagattactactgcaacctcagtcctctacaggtt
caactgtatgaggactttgcaaagtcccgggcaaaggtggacgtggatgatgtaatctca
actacgtctacacaagaggaagaagagaaacccaaactaaaggccaccggacatgtcttc
caggctctgcagtatctgaggaagctgtgtaatcacccggcactggtgctgacccctcaa
cacccagagtacaaacacatcacagaacagctgagcagccaacactccaacctcagagac
attcagcacgcccccaaactctcagccctcaaacagctgctgttggactgtggactgggt
tcatctggagcgtctgatggctgcaccgaggctgtggtggcccagcaccgcgttctgatc
ttctgccaactgaagagcatgctggacatcgtggagcaggacctgctcaaaacacagctg
cccaccatctcctacctcaggctggacggaggcgttcaggccggcctcagacactccatt
gtctccaggttcaacaatgacccgtccattgatgttctgctgctcactacccatgtgggt
ggactgggattgaatctgaccggggcagatactgtggtgtttgtggagcacgactggaac
cccatgagagacttgcaggccatggaccgagctcacagaataggacagaaacgtgtggtg
aatgtgtatcgtctcatcactcgaggcacgctggaggaaaagatcatgggtctgcagaaa
tttaagatgaccatcgcgaatacagtcatcagccaagagaacgccagtctgcagagtatg
ggcacagaacagctgctcaacctcttcacactggacaaggatgaagcagtgaagagcgag
gcgggtgcatcgtcctctggtaaaaccagcatgaagtctgttctggatggactgggcgac
ctgtgggaccagcagctctatgagaatgaatacgacctggacagcttcatacactccctc
aaatga
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