Rhinichthys klamathensis goyatoka (western speckled dace): 130083183
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Entry
130083183 CDS
T09701
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04141
Protein processing in endoplasmic reticulum
rkg04210
Apoptosis
rkg04217
Necroptosis
rkg04218
Cellular senescence
rkg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130083183 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130083183 (capn1a)
04217 Necroptosis
130083183 (capn1a)
04218 Cellular senescence
130083183 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130083183 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130083183 (capn1a)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
130083183 (capn1a)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C2: calpain family
130083183 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
130083183
NCBI-ProteinID:
XP_056104214
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MQTTVGSLSWTSSSMFTYGGISAQISANRLKADGVGSFEQALHFQNQDFEALKQECLEGG
YLFEDPCFPAEPPSLGFKELAPHSSKTQDVEWMRPTELCDDPQFIVGGASRTDICQGALG
DCWLLAAIASLTLNEKLLHRVVPQGQSFQDDYAGIFHFQFWQFGEWVDIVIDDRLPVKDG
ELMFVHSAEGNEFWSALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRD
LYRIIGKALERGSLLGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEFRGHTERLIR
IRNPWGQVEWTGAWSDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFSEFLRQFSRLEICNL
SPDALSDDDLSHWNTIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEV
ACSLLVALMQKDRRRHRRHGQDMHTIGFALYEIPEEYAGCQNVHLKKDFFLTNSSSARSE
TFINLREVSTRLSLPPGEYIIVPSTFEPSQEADFVLRVFTEKQSETEELDDEISADLEDE
AEITEDDIDDSFKSMFEQLAGEDMEISVRELKTILNRVVSRHKDLKTDGFSMESCRTMVN
LLDKDGSARLGLVEFQILWNKIRKMLGIFREFDIDKSGTMNSYEMRIAVESAGFKLNNRL
NQILVARYAENDVIDFDNFVCCLIKLESMFRTFQQLDKDGTGTADMNLSEVLWFDFLII
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgacagtgggttcattgagttggacttcttccagcatgttcacatatggaggg
atctcagcacagatcagtgctaacaggctaaaggcggatggtgtgggctcttttgagcag
gccttacacttccagaaccaggattttgaggccctcaaacaggaatgtttggaagggggc
tacctgtttgaagacccctgctttccagccgaaccgccctcgcttggcttcaaagaactc
gctccacattcctccaaaacccaggatgtggagtggatgcgccctacggagctctgtgat
gatcctcagttcattgtgggaggagcttcgcggacagacatctgtcagggagctctgggt
gactgctggctcctcgctgctatagcttctctgactctgaatgaaaaactcctccacagg
gtcgtaccccaaggccagagctttcaggatgactatgctggaatattccactttcagttc
tggcagtttggcgagtgggtcgacattgtgattgacgatcgactcccggtcaaagacgga
gagctcatgtttgtccattcagcagagggaaatgagttctggagtgccttggttgaaaag
gcctatgccaagctaaatggctcctatgaagctctctctggaggctccaccactgagggt
tttgaggatttcaccggaggggtctcagagatgtacgagctccggaaagctccgagagac
ctgtaccgaatcatcggcaaagccctggaaagaggctccctgctgggctgctctattgat
atcaccagtgcctttgacatggaatcggtgacgtttaagaagctggttaagggccacgct
tactcagtgactgctctcaaacaggtggaatttaggggccatacggagaggcttatccgt
atccgtaacccgtggggtcaggtagaatggacgggggcctggagtgataactctcctgaa
tgggacgagatcgatccatctgaaaaggatgacttgcacttacaaatggaggatggcgag
ttctggatgtcattcagtgagtttttgcggcagttctccaggctggagatttgtaatctg
tcccctgatgctctgagtgatgatgacctgagccactggaacaccatcaagtttcacggc
gcctggcggagaggaagtaccgcaggaggctgtcgaaatcatcccaacacattttggatc
aatccacagtataagatcacgctgctggaggaagacgatgacccggaggatgaagaagtg
gcctgcagcttactggtggctttgatgcagaaagaccgcagacggcaccgccgccacggc
caggacatgcacaccatcggttttgcgctctacgagattcctgaagagtacgcaggctgt
cagaatgtgcaccttaaaaaggacttcttcctgaccaactcatcaagcgcccgctccgag
accttcatcaacctgcgcgaggtgagcacgcgtctcagcctccctcctggggaatacatc
atcgtcccctccacctttgaacccagccaagaggctgattttgtcctgcgagtcttcaca
gagaagcagtcagagacagaggagttggatgatgagatttcagctgacctggaggatgag
gcagaaattacagaggatgacattgatgactctttcaagtccatgtttgagcagctggct
ggagaggatatggagatatctgtccgtgaactcaagactattctcaacagagtagtgtcc
agacacaaggatctgaagacagatggcttcagcatggagtcctgcagaacgatggtcaac
ctcttggataaagatggtagtgcacgtttgggtttagtagagtttcagatcctctggaac
aaaataaggaagatgctggggatcttcagagagtttgatattgataagtcagggactatg
aactcttatgagatgcgtatcgctgtagaatcagcaggctttaaactcaacaatagactc
aaccagatccttgttgccagatacgctgagaatgatgtcatcgattttgataactttgtc
tgctgcttgatcaaactcgagtccatgttcaggacttttcagcagttggacaaagatgga
acaggaacggctgacatgaacttgtctgaggtgctttggtttgatttcttgattatttaa
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