Rhinichthys klamathensis goyatoka (western speckled dace): 130083387
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Entry
130083387 CDS
T09701
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130083387 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130083387 (puf60b)
Spliceosome [BR:
rkg03041
]
Complex A
U2 snRNP components
U2 related factors
130083387 (puf60b)
Complex B
130083387 (puf60b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
130083387
NCBI-ProteinID:
XP_056104369
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All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MMENGQGTGAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSSLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEA
RAFNRIYVASIHPDLSDEDIKSVFEAFGKIKSCMLVREPTTGKHKGYGFIEYDKPQSSLD
AVSSMNLFDLGGQYLRVGKAVTPPMPLLTPMTPGGLPPAAAVAAAAATAKITAQEAVAGS
VLGSLASPAHILSQQMGLPQAVLAAQAPGIITGVTPARPTLPVVPQVGLVNPVLASPPVT
TSASVGTPTSTAQTHTEVKREEDNRRPEEDPSAPVGNGQDSELEQLSVSASGGKQTVILS
KSTVMVLRNMVGPEDIDDDLEGEVMEECGKYGAVNRVIIYQERQGEEDDAEIIVKIFVEF
SDADEMNKAIQALNNRWFAGRKVVAELYDQERFNNSDLTA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatggacaaggcacaggtgcaaagcttggattaccgcctcttactccggag
cagcaggaggcgctacagaaggctaagaagtatgcaatggaacagagcatcaagagtgtt
ttagtgaaacagaccatcgcccaccagcaacagcagctcactaacttacagatggcagca
gtgacaatgggctttggagatcctctctcatctttacaatcggtggcagcacagaggcag
agagctctggccatcatgtgtcgtgtgtatgtgggctccatttattacgagctgggggag
gataccatccggcaggccttcgccccctttggtcccattaagagcattgatatgtcctgg
gactctgtcaccatgaaacacaagggctttgcctttgttgagtatgaagttcctgaagca
gctcagctggccttggagcagatgaactcagtcatgctgggtgggaggaacattaaggtg
gggcggccaagtaacattggacaggcgcagcctatcattgaccaactggcagaggaggca
cgtgccttcaaccgaatctatgttgcctctatccaccctgatctatctgacgaggacatc
aagagcgtctttgaggccttcggaaagattaaaagttgcatgctggtgcgggaacccacc
acaggaaagcacaagggctacggatttattgaatacgataagcctcagtcatcactggat
gccgtctcatctatgaacctgtttgaccttggaggtcagtacctaagagtggggaaggct
gttactcctcccatgcctctcttgacacctatgacccctggaggtctgccccctgctgca
gctgtggcggctgctgctgccaccgccaagatcactgcccaggaggctgttgctgggtca
gtgctgggttctcttgcttcaccagcacacattctcagtcagcaaatgggacttccacag
gctgtactggctgcccaggcccctgggatcatcacaggtgtgacacctgctcgccccact
ctccctgtagtcccacaggttggtttggtcaacccagtactagcatccccaccagtcaca
acatctgcttctgtgggaacaccaacatctacagctcaaacacatacagaagtcaagaga
gaggaagacaacaggcggcctgaagaagatccgagtgcaccggttggaaatggacaggac
agtgaactggagcagctaagtgtcagtgcaagtggaggaaaacaaacggtcatactgtca
aagtcaacagttatggtgctacgcaacatggtgggcccagaggacattgacgatgacctg
gaaggcgaagtgatggaggaatgtgggaagtatggtgctgttaatcgggttatcatatac
caagaacgacagggtgaggaggacgatgctgagataatagtgaagatcttcgtggagttc
tctgatgctgatgaaatgaacaaggccatccaagctctcaacaaccgctggtttgcaggt
cgcaaggttgttgccgagttgtacgatcaagagcgttttaataacagtgacctcactgca
taa
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